Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PMS1P54277 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PMS1P54277 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.18■□□□□ 0.18
PMS1P54277 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.18■□□□□ 0.18
PMS1P54277 FAM8A4P-201ENST00000435433 1213 ntBASIC16.18■□□□□ 0.18
PMS1P54277 TTTY23B-201ENST00000442790 549 ntBASIC16.18■□□□□ 0.18
PMS1P54277 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.18■□□□□ 0.18
PMS1P54277 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.18■□□□□ 0.18
PMS1P54277 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.18■□□□□ 0.18
PMS1P54277 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PMS1P54277 BTNL10-201ENST00000595971 695 ntBASIC16.18■□□□□ 0.18
PMS1P54277 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.18■□□□□ 0.18
PMS1P54277 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PMS1P54277 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PMS1P54277 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PMS1P54277 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PMS1P54277 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16.18■□□□□ 0.18
PMS1P54277 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.18■□□□□ 0.18
PMS1P54277 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC16.18■□□□□ 0.18
PMS1P54277 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PMS1P54277 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PMS1P54277 TCAM1P-207ENST00000485295 1537 ntBASIC16.18■□□□□ 0.18
PMS1P54277 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PMS1P54277 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PMS1P54277 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.18■□□□□ 0.18
PMS1P54277 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PMS1P54277 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PMS1P54277 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PMS1P54277 AL161772.1-201ENST00000610494 4412 ntBASIC16.18■□□□□ 0.18
PMS1P54277 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PMS1P54277 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PMS1P54277 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PMS1P54277 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PMS1P54277 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PMS1P54277 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC16.17■□□□□ 0.18
PMS1P54277 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PMS1P54277 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PMS1P54277 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PMS1P54277 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PMS1P54277 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PMS1P54277 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.17■□□□□ 0.18
PMS1P54277 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PMS1P54277 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PMS1P54277 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PMS1P54277 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16.17■□□□□ 0.18
PMS1P54277 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PMS1P54277 CNN2P8-201ENST00000421872 913 ntBASIC16.17■□□□□ 0.18
PMS1P54277 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.17■□□□□ 0.18
PMS1P54277 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.17■□□□□ 0.18
PMS1P54277 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PMS1P54277 KRT90P-201ENST00000549264 1064 ntBASIC16.17■□□□□ 0.18
PMS1P54277 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.17■□□□□ 0.18
PMS1P54277 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.17■□□□□ 0.18
PMS1P54277 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PMS1P54277 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PMS1P54277 AL358472.3-201ENST00000608147 415 ntBASIC16.17■□□□□ 0.18
PMS1P54277 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.17■□□□□ 0.18
PMS1P54277 AC002472.3-201ENST00000640124 621 ntBASIC16.17■□□□□ 0.18
PMS1P54277 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PMS1P54277 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PMS1P54277 AC090643.2-201ENST00000623442 2029 ntBASIC16.17■□□□□ 0.18
PMS1P54277 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
PMS1P54277 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PMS1P54277 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PMS1P54277 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC16.17■□□□□ 0.18
PMS1P54277 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PMS1P54277 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC16.17■□□□□ 0.18
PMS1P54277 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PMS1P54277 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.17■□□□□ 0.18
PMS1P54277 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PMS1P54277 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PMS1P54277 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PMS1P54277 MYO15B-237ENST00000642007 4893 ntBASIC16.17■□□□□ 0.18
PMS1P54277 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PMS1P54277 AC130686.1-201ENST00000622936 2466 ntBASIC16.17■□□□□ 0.18
PMS1P54277 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC16.17■□□□□ 0.18
PMS1P54277 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PMS1P54277 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PMS1P54277 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PMS1P54277 AL359881.3-201ENST00000602640 1721 ntBASIC16.16■□□□□ 0.18
PMS1P54277 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PMS1P54277 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PMS1P54277 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PMS1P54277 MAPT-IT1-201ENST00000624111 3016 ntBASIC16.16■□□□□ 0.18
PMS1P54277 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PMS1P54277 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PMS1P54277 AL157996.1-201ENST00000624684 2299 ntBASIC16.16■□□□□ 0.18
PMS1P54277 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.16■□□□□ 0.18
PMS1P54277 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.16■□□□□ 0.18
PMS1P54277 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PMS1P54277 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
PMS1P54277 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PMS1P54277 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PMS1P54277 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PMS1P54277 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.16■□□□□ 0.18
PMS1P54277 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PMS1P54277 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PMS1P54277 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PMS1P54277 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PMS1P54277 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms