Protein–RNA interactions for Protein: P53539

FOSB, Protein fosB, humanhuman

Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOSBP53539 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.31■□□□□ 0.36
FOSBP53539 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOSBP53539 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOSBP53539 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.31■□□□□ 0.36
FOSBP53539 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FOSBP53539 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.31■□□□□ 0.36
FOSBP53539 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.31■□□□□ 0.36
FOSBP53539 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
FOSBP53539 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
FOSBP53539 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FOSBP53539 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOSBP53539 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOSBP53539 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FOSBP53539 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
FOSBP53539 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FOSBP53539 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
FOSBP53539 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOSBP53539 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
FOSBP53539 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.3■□□□□ 0.36
FOSBP53539 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
FOSBP53539 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOSBP53539 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOSBP53539 AC041040.2-201ENST00000622926 2899 ntBASIC17.3■□□□□ 0.36
FOSBP53539 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOSBP53539 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.3■□□□□ 0.36
FOSBP53539 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOSBP53539 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.3■□□□□ 0.36
FOSBP53539 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.3■□□□□ 0.36
FOSBP53539 AL391280.1-201ENST00000506969 1062 ntBASIC17.3■□□□□ 0.36
FOSBP53539 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.3■□□□□ 0.36
FOSBP53539 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOSBP53539 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.3■□□□□ 0.36
FOSBP53539 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC17.3■□□□□ 0.36
FOSBP53539 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.3■□□□□ 0.36
FOSBP53539 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.3■□□□□ 0.36
FOSBP53539 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.3■□□□□ 0.36
FOSBP53539 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.3■□□□□ 0.36
FOSBP53539 AP000240.1-201ENST00000609910 452 ntBASIC17.3■□□□□ 0.36
FOSBP53539 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
FOSBP53539 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.3■□□□□ 0.36
FOSBP53539 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.3■□□□□ 0.36
FOSBP53539 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC17.3■□□□□ 0.36
FOSBP53539 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
FOSBP53539 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOSBP53539 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.3■□□□□ 0.36
FOSBP53539 AC006504.5-208ENST00000588784 2401 ntBASIC17.3■□□□□ 0.36
FOSBP53539 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOSBP53539 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOSBP53539 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC17.3■□□□□ 0.36
FOSBP53539 AC009093.2-202ENST00000620513 2079 ntBASIC17.3■□□□□ 0.36
FOSBP53539 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FOSBP53539 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC17.3■□□□□ 0.36
FOSBP53539 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
FOSBP53539 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FOSBP53539 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC17.29■□□□□ 0.36
FOSBP53539 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FOSBP53539 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOSBP53539 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOSBP53539 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC17.29■□□□□ 0.36
FOSBP53539 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FOSBP53539 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FOSBP53539 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FOSBP53539 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.29■□□□□ 0.36
FOSBP53539 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOSBP53539 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOSBP53539 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOSBP53539 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOSBP53539 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOSBP53539 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
FOSBP53539 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
FOSBP53539 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOSBP53539 RN7SKP230-201ENST00000365642 335 ntBASIC17.29■□□□□ 0.36
FOSBP53539 ACKR1-201ENST00000368121 1240 ntBASIC17.29■□□□□ 0.36
FOSBP53539 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOSBP53539 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOSBP53539 AP001889.1-201ENST00000525414 633 ntBASIC17.29■□□□□ 0.36
FOSBP53539 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
FOSBP53539 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
FOSBP53539 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.29■□□□□ 0.36
FOSBP53539 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOSBP53539 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
FOSBP53539 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FOSBP53539 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
FOSBP53539 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
FOSBP53539 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
FOSBP53539 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOSBP53539 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOSBP53539 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FOSBP53539 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
FOSBP53539 AC104581.4-201ENST00000623126 3052 ntBASIC17.29■□□□□ 0.36
FOSBP53539 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOSBP53539 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOSBP53539 AGGF1P1-201ENST00000509500 2073 ntBASIC17.28■□□□□ 0.36
FOSBP53539 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
FOSBP53539 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOSBP53539 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOSBP53539 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FOSBP53539 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
FOSBP53539 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOSBP53539 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms