Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-5P52952 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
NKX2-5P52952 SLC22A6-202ENST00000377871 2151 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-5P52952 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-5P52952 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-5P52952 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-5P52952 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
NKX2-5P52952 AC135050.1-201ENST00000622229 3380 ntTSL 2 BASIC12.5□□□□□ -0.41
NKX2-5P52952 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-5P52952 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC12.5□□□□□ -0.41
NKX2-5P52952 RCN1P2-201ENST00000398357 915 ntBASIC12.5□□□□□ -0.41
NKX2-5P52952 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC12.5□□□□□ -0.41
NKX2-5P52952 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-5P52952 AC246785.2-201ENST00000432512 513 ntBASIC12.5□□□□□ -0.41
NKX2-5P52952 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.5□□□□□ -0.41
NKX2-5P52952 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.5□□□□□ -0.41
NKX2-5P52952 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-5P52952 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC12.5□□□□□ -0.41
NKX2-5P52952 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC12.5□□□□□ -0.41
NKX2-5P52952 AP005901.3-202ENST00000581653 237 ntBASIC12.5□□□□□ -0.41
NKX2-5P52952 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC12.5□□□□□ -0.41
NKX2-5P52952 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC12.5□□□□□ -0.41
NKX2-5P52952 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC12.5□□□□□ -0.41
NKX2-5P52952 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-5P52952 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-5P52952 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.5□□□□□ -0.41
NKX2-5P52952 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.5□□□□□ -0.41
NKX2-5P52952 AC011840.2-201ENST00000563063 1520 ntBASIC12.5□□□□□ -0.41
NKX2-5P52952 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
NKX2-5P52952 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-5P52952 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
NKX2-5P52952 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
NKX2-5P52952 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-5P52952 MARK2P9-201ENST00000430958 1727 ntBASIC12.5□□□□□ -0.41
NKX2-5P52952 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC12.5□□□□□ -0.41
NKX2-5P52952 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
NKX2-5P52952 AC215219.1-201ENST00000400706 1817 ntBASIC12.5□□□□□ -0.41
NKX2-5P52952 AC007614.4-201ENST00000564048 1827 ntBASIC12.5□□□□□ -0.41
NKX2-5P52952 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
NKX2-5P52952 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-5P52952 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
NKX2-5P52952 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-5P52952 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-5P52952 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-5P52952 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-5P52952 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-5P52952 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-5P52952 CAPN13-201ENST00000295055 2683 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
NKX2-5P52952 TGFBI-201ENST00000442011 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-5P52952 TUFT1-202ENST00000368848 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-5P52952 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-5P52952 APEH-201ENST00000296456 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-5P52952 USP30-201ENST00000257548 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-5P52952 ARHGEF4-212ENST00000525839 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-5P52952 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-5P52952 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-5P52952 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-5P52952 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
NKX2-5P52952 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-5P52952 APBB1-223ENST00000618005 2107 ntTSL 5 BASIC12.49□□□□□ -0.41
NKX2-5P52952 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-5P52952 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC12.49□□□□□ -0.41
NKX2-5P52952 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.49□□□□□ -0.41
NKX2-5P52952 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-5P52952 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-5P52952 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-5P52952 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
NKX2-5P52952 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC12.49□□□□□ -0.41
NKX2-5P52952 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
NKX2-5P52952 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
NKX2-5P52952 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-5P52952 BX537318.2-201ENST00000624893 4162 ntBASIC12.49□□□□□ -0.41
NKX2-5P52952 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
NKX2-5P52952 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
NKX2-5P52952 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-5P52952 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.49□□□□□ -0.41
NKX2-5P52952 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-5P52952 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-5P52952 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.49□□□□□ -0.41
NKX2-5P52952 AL391647.1-201ENST00000395664 511 ntBASIC12.49□□□□□ -0.41
NKX2-5P52952 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC12.49□□□□□ -0.41
NKX2-5P52952 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.49□□□□□ -0.41
NKX2-5P52952 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-5P52952 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-5P52952 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC12.49□□□□□ -0.41
NKX2-5P52952 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC12.49□□□□□ -0.41
NKX2-5P52952 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC12.49□□□□□ -0.41
NKX2-5P52952 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-5P52952 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.49□□□□□ -0.41
NKX2-5P52952 SNX21-213ENST00000614929 587 ntTSL 5 BASIC12.49□□□□□ -0.41
NKX2-5P52952 AC010947.1-201ENST00000623454 693 ntBASIC12.49□□□□□ -0.41
NKX2-5P52952 DZIP1L-201ENST00000327532 3493 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-5P52952 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-5P52952 RANGAP1-201ENST00000356244 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-5P52952 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-5P52952 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
NKX2-5P52952 ARAP1-209ENST00000455638 2683 ntTSL 5 BASIC12.49□□□□□ -0.41
NKX2-5P52952 TP53TG5-201ENST00000372726 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-5P52952 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC12.49□□□□□ -0.41
NKX2-5P52952 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms