Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CBX5P45973 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CBX5P45973 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CBX5P45973 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CBX5P45973 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CBX5P45973 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CBX5P45973 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.8□□□□□ -0.36
CBX5P45973 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CBX5P45973 PCDHB17P-202ENST00000623466 3066 ntBASIC12.8□□□□□ -0.36
CBX5P45973 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CBX5P45973 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CBX5P45973 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.79□□□□□ -0.36
CBX5P45973 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.79□□□□□ -0.36
CBX5P45973 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CBX5P45973 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CBX5P45973 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CBX5P45973 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CBX5P45973 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.79□□□□□ -0.36
CBX5P45973 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CBX5P45973 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CBX5P45973 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CBX5P45973 TCAM1P-207ENST00000485295 1537 ntBASIC12.79□□□□□ -0.36
CBX5P45973 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.79□□□□□ -0.36
CBX5P45973 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CBX5P45973 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CBX5P45973 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CBX5P45973 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CBX5P45973 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CBX5P45973 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
CBX5P45973 AC009078.2-202ENST00000463353 338 ntBASIC12.79□□□□□ -0.36
CBX5P45973 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
CBX5P45973 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CBX5P45973 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.79□□□□□ -0.36
CBX5P45973 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.79□□□□□ -0.36
CBX5P45973 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.79□□□□□ -0.36
CBX5P45973 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.79□□□□□ -0.36
CBX5P45973 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.79□□□□□ -0.36
CBX5P45973 AC040169.1-201ENST00000565382 521 ntBASIC12.79□□□□□ -0.36
CBX5P45973 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.79□□□□□ -0.36
CBX5P45973 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.79□□□□□ -0.36
CBX5P45973 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.79□□□□□ -0.36
CBX5P45973 AL033527.5-202ENST00000641632 1098 ntBASIC12.79□□□□□ -0.36
CBX5P45973 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC12.79□□□□□ -0.36
CBX5P45973 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CBX5P45973 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CBX5P45973 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CBX5P45973 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.79□□□□□ -0.36
CBX5P45973 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CBX5P45973 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CBX5P45973 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CBX5P45973 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CBX5P45973 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CBX5P45973 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CBX5P45973 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.79□□□□□ -0.36
CBX5P45973 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.79□□□□□ -0.36
CBX5P45973 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.79□□□□□ -0.36
CBX5P45973 CETN4P-206ENST00000642099 2168 ntBASIC12.79□□□□□ -0.36
CBX5P45973 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CBX5P45973 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CBX5P45973 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CBX5P45973 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CBX5P45973 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.78□□□□□ -0.36
CBX5P45973 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CBX5P45973 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CBX5P45973 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CBX5P45973 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CBX5P45973 KRT8P24-201ENST00000560290 1559 ntBASIC12.78□□□□□ -0.36
CBX5P45973 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.78□□□□□ -0.36
CBX5P45973 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CBX5P45973 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CBX5P45973 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CBX5P45973 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CBX5P45973 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC12.78□□□□□ -0.36
CBX5P45973 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.78□□□□□ -0.36
CBX5P45973 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CBX5P45973 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.78□□□□□ -0.36
CBX5P45973 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CBX5P45973 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CBX5P45973 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CBX5P45973 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CBX5P45973 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.78□□□□□ -0.36
CBX5P45973 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CBX5P45973 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CBX5P45973 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CBX5P45973 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CBX5P45973 AC023274.1-201ENST00000418278 595 ntBASIC12.78□□□□□ -0.36
CBX5P45973 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CBX5P45973 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CBX5P45973 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.78□□□□□ -0.36
CBX5P45973 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.78□□□□□ -0.36
CBX5P45973 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CBX5P45973 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.78□□□□□ -0.36
CBX5P45973 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CBX5P45973 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CBX5P45973 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.78□□□□□ -0.36
CBX5P45973 AL589739.1-201ENST00000607720 493 ntBASIC12.78□□□□□ -0.36
CBX5P45973 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CBX5P45973 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.78□□□□□ -0.36
CBX5P45973 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.78□□□□□ -0.36
CBX5P45973 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms