Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.13□□□□□ -0.47
NKX2-1P43699 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC12.13□□□□□ -0.47
NKX2-1P43699 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.13□□□□□ -0.47
NKX2-1P43699 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.13□□□□□ -0.47
NKX2-1P43699 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.13□□□□□ -0.47
NKX2-1P43699 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
NKX2-1P43699 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
NKX2-1P43699 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.13□□□□□ -0.47
NKX2-1P43699 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
NKX2-1P43699 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.13□□□□□ -0.47
NKX2-1P43699 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
NKX2-1P43699 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.13□□□□□ -0.47
NKX2-1P43699 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.13□□□□□ -0.47
NKX2-1P43699 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.13□□□□□ -0.47
NKX2-1P43699 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.13□□□□□ -0.47
NKX2-1P43699 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.12□□□□□ -0.47
NKX2-1P43699 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.12□□□□□ -0.47
NKX2-1P43699 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.12□□□□□ -0.47
NKX2-1P43699 KRT8P14-201ENST00000414254 1442 ntBASIC12.12□□□□□ -0.47
NKX2-1P43699 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-1P43699 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
NKX2-1P43699 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
NKX2-1P43699 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-1P43699 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-1P43699 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-1P43699 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
NKX2-1P43699 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
NKX2-1P43699 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-1P43699 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-1P43699 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-1P43699 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.12□□□□□ -0.47
NKX2-1P43699 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-1P43699 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-1P43699 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.12□□□□□ -0.47
NKX2-1P43699 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.12□□□□□ -0.47
NKX2-1P43699 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-1P43699 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.12□□□□□ -0.47
NKX2-1P43699 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.12□□□□□ -0.47
NKX2-1P43699 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.12□□□□□ -0.47
NKX2-1P43699 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.12□□□□□ -0.47
NKX2-1P43699 AC005829.1-201ENST00000570002 483 ntBASIC12.12□□□□□ -0.47
NKX2-1P43699 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.12□□□□□ -0.47
NKX2-1P43699 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.12□□□□□ -0.47
NKX2-1P43699 AL671883.3-201ENST00000603274 991 ntBASIC12.12□□□□□ -0.47
NKX2-1P43699 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.12□□□□□ -0.47
NKX2-1P43699 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.12□□□□□ -0.47
NKX2-1P43699 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-1P43699 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-1P43699 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-1P43699 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
NKX2-1P43699 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.12□□□□□ -0.47
NKX2-1P43699 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
NKX2-1P43699 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-1P43699 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-1P43699 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.12□□□□□ -0.47
NKX2-1P43699 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-1P43699 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.12□□□□□ -0.47
NKX2-1P43699 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.12□□□□□ -0.47
NKX2-1P43699 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
NKX2-1P43699 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-1P43699 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
NKX2-1P43699 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-1P43699 REXO1L1P-201ENST00000379010 6598 ntBASIC12.12□□□□□ -0.47
NKX2-1P43699 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-1P43699 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-1P43699 Z82170.1-201ENST00000625081 3192 ntBASIC12.12□□□□□ -0.47
NKX2-1P43699 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
NKX2-1P43699 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
NKX2-1P43699 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-1P43699 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.11□□□□□ -0.47
NKX2-1P43699 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
NKX2-1P43699 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.11□□□□□ -0.47
NKX2-1P43699 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-1P43699 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.11□□□□□ -0.47
NKX2-1P43699 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-1P43699 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.11□□□□□ -0.47
NKX2-1P43699 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
NKX2-1P43699 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-1P43699 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-1P43699 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
NKX2-1P43699 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms