Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
CXCL5P42830 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CXCL5P42830 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
CXCL5P42830 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CXCL5P42830 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC10.02□□□□□ -0.81
CXCL5P42830 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
CXCL5P42830 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC10.02□□□□□ -0.81
CXCL5P42830 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC10.02□□□□□ -0.81
CXCL5P42830 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC10.02□□□□□ -0.81
CXCL5P42830 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC10.02□□□□□ -0.81
CXCL5P42830 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
CXCL5P42830 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC10.02□□□□□ -0.81
CXCL5P42830 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC10.02□□□□□ -0.81
CXCL5P42830 RPS15-202ENST00000585665 467 ntTSL 3 BASIC10.02□□□□□ -0.81
CXCL5P42830 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC10.02□□□□□ -0.81
CXCL5P42830 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC10.02□□□□□ -0.81
CXCL5P42830 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC10.02□□□□□ -0.81
CXCL5P42830 5S_rRNA.22-201ENST00000614916 106 ntBASIC10.02□□□□□ -0.81
CXCL5P42830 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC10.02□□□□□ -0.81
CXCL5P42830 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
CXCL5P42830 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC10.02□□□□□ -0.81
CXCL5P42830 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
CXCL5P42830 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
CXCL5P42830 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
CXCL5P42830 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC10.02□□□□□ -0.81
CXCL5P42830 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
CXCL5P42830 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC10.02□□□□□ -0.81
CXCL5P42830 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC10.02□□□□□ -0.81
CXCL5P42830 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC10.02□□□□□ -0.81
CXCL5P42830 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CXCL5P42830 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
CXCL5P42830 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
CXCL5P42830 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CXCL5P42830 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
CXCL5P42830 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CXCL5P42830 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
CXCL5P42830 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC10.02□□□□□ -0.81
CXCL5P42830 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC10.02□□□□□ -0.81
CXCL5P42830 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
CXCL5P42830 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC10.01□□□□□ -0.81
CXCL5P42830 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC10.01□□□□□ -0.81
CXCL5P42830 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CXCL5P42830 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
CXCL5P42830 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC10.01□□□□□ -0.81
CXCL5P42830 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC10.01□□□□□ -0.81
CXCL5P42830 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
CXCL5P42830 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CXCL5P42830 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
CXCL5P42830 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CXCL5P42830 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
CXCL5P42830 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
CXCL5P42830 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC10.01□□□□□ -0.81
CXCL5P42830 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC10.01□□□□□ -0.81
CXCL5P42830 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC10.01□□□□□ -0.81
CXCL5P42830 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CXCL5P42830 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
CXCL5P42830 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
CXCL5P42830 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CXCL5P42830 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CXCL5P42830 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
CXCL5P42830 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC10.01□□□□□ -0.81
CXCL5P42830 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC10.01□□□□□ -0.81
CXCL5P42830 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
CXCL5P42830 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC10.01□□□□□ -0.81
CXCL5P42830 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC10.01□□□□□ -0.81
CXCL5P42830 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC10.01□□□□□ -0.81
CXCL5P42830 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC10.01□□□□□ -0.81
CXCL5P42830 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC10.01□□□□□ -0.81
CXCL5P42830 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC10.01□□□□□ -0.81
CXCL5P42830 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC10.01□□□□□ -0.81
CXCL5P42830 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC10.01□□□□□ -0.81
CXCL5P42830 AL512356.2-201ENST00000546955 174 ntBASIC10.01□□□□□ -0.81
CXCL5P42830 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC10.01□□□□□ -0.81
CXCL5P42830 AC051619.7-201ENST00000568314 623 ntBASIC10.01□□□□□ -0.81
CXCL5P42830 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC10.01□□□□□ -0.81
CXCL5P42830 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CXCL5P42830 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC10.01□□□□□ -0.81
CXCL5P42830 MIR6074-201ENST00000612054 107 ntBASIC10.01□□□□□ -0.81
CXCL5P42830 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC10.01□□□□□ -0.81
CXCL5P42830 AL603764.1-201ENST00000636452 321 ntBASIC10.01□□□□□ -0.81
CXCL5P42830 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC10.01□□□□□ -0.81
CXCL5P42830 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
CXCL5P42830 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CXCL5P42830 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CXCL5P42830 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
CXCL5P42830 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
CXCL5P42830 INE2-201ENST00000630399 1874 ntBASIC10.01□□□□□ -0.81
CXCL5P42830 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CXCL5P42830 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
CXCL5P42830 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
CXCL5P42830 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CXCL5P42830 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
CXCL5P42830 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
CXCL5P42830 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CXCL5P42830 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CXCL5P42830 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC10.01□□□□□ -0.81
CXCL5P42830 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC10.01□□□□□ -0.81
CXCL5P42830 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
CXCL5P42830 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
CXCL5P42830 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC10.01□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms