Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRPHP41219 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.62■□□□□ 0.25
PRPHP41219 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.62■□□□□ 0.25
PRPHP41219 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.62■□□□□ 0.25
PRPHP41219 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC16.62■□□□□ 0.25
PRPHP41219 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRPHP41219 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRPHP41219 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRPHP41219 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRPHP41219 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
PRPHP41219 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.62■□□□□ 0.25
PRPHP41219 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRPHP41219 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.62■□□□□ 0.25
PRPHP41219 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.62■□□□□ 0.25
PRPHP41219 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRPHP41219 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.61■□□□□ 0.25
PRPHP41219 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRPHP41219 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRPHP41219 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRPHP41219 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRPHP41219 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.61■□□□□ 0.25
PRPHP41219 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PRPHP41219 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRPHP41219 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRPHP41219 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRPHP41219 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.61■□□□□ 0.25
PRPHP41219 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRPHP41219 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRPHP41219 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRPHP41219 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRPHP41219 MIR326-201ENST00000362220 95 ntBASIC16.61■□□□□ 0.25
PRPHP41219 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRPHP41219 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
PRPHP41219 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PRPHP41219 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.61■□□□□ 0.25
PRPHP41219 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.61■□□□□ 0.25
PRPHP41219 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.61■□□□□ 0.25
PRPHP41219 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PRPHP41219 AC099336.1-201ENST00000417053 1171 ntBASIC16.61■□□□□ 0.25
PRPHP41219 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.61■□□□□ 0.25
PRPHP41219 CSF2RBP1-201ENST00000447905 391 ntBASIC16.61■□□□□ 0.25
PRPHP41219 AC022210.1-201ENST00000449856 793 ntBASIC16.61■□□□□ 0.25
PRPHP41219 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PRPHP41219 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.61■□□□□ 0.25
PRPHP41219 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.61■□□□□ 0.25
PRPHP41219 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.61■□□□□ 0.25
PRPHP41219 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.61■□□□□ 0.25
PRPHP41219 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRPHP41219 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.61■□□□□ 0.25
PRPHP41219 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRPHP41219 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRPHP41219 GOLGA8VP-201ENST00000559009 1798 ntBASIC16.61■□□□□ 0.25
PRPHP41219 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PRPHP41219 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRPHP41219 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRPHP41219 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.61■□□□□ 0.25
PRPHP41219 AC020910.6-201ENST00000623084 1459 ntBASIC16.61■□□□□ 0.25
PRPHP41219 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
PRPHP41219 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRPHP41219 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.6■□□□□ 0.25
PRPHP41219 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRPHP41219 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.6■□□□□ 0.25
PRPHP41219 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRPHP41219 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRPHP41219 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.6■□□□□ 0.25
PRPHP41219 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRPHP41219 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRPHP41219 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PRPHP41219 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRPHP41219 AL023775.1-201ENST00000454907 1746 ntBASIC16.6■□□□□ 0.25
PRPHP41219 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRPHP41219 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRPHP41219 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRPHP41219 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.6■□□□□ 0.25
PRPHP41219 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.6■□□□□ 0.25
PRPHP41219 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.6■□□□□ 0.25
PRPHP41219 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.6■□□□□ 0.25
PRPHP41219 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRPHP41219 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.6■□□□□ 0.25
PRPHP41219 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.6■□□□□ 0.25
PRPHP41219 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.6■□□□□ 0.25
PRPHP41219 HILS1-202ENST00000545329 423 ntBASIC16.6■□□□□ 0.25
PRPHP41219 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.6■□□□□ 0.25
PRPHP41219 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.6■□□□□ 0.25
PRPHP41219 DUX4L46-201ENST00000566845 751 ntBASIC16.6■□□□□ 0.25
PRPHP41219 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.6■□□□□ 0.25
PRPHP41219 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRPHP41219 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRPHP41219 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRPHP41219 AC132192.2-201ENST00000596206 1147 ntBASIC16.6■□□□□ 0.25
PRPHP41219 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.6■□□□□ 0.25
PRPHP41219 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC16.6■□□□□ 0.25
PRPHP41219 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PRPHP41219 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.6■□□□□ 0.25
PRPHP41219 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRPHP41219 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
PRPHP41219 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRPHP41219 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.6■□□□□ 0.25
PRPHP41219 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
PRPHP41219 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms