Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC18.52■□□□□ 0.56
ATP6V1AP38606 HKR1-225ENST00000592168 566 ntTSL 4 BASIC18.52■□□□□ 0.56
ATP6V1AP38606 SIGLEC22P-201ENST00000599104 714 ntBASIC18.52■□□□□ 0.56
ATP6V1AP38606 AQP7P3-201ENST00000624547 1041 ntBASIC18.52■□□□□ 0.56
ATP6V1AP38606 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP6V1AP38606 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP6V1AP38606 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP6V1AP38606 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP6V1AP38606 AC021305.1-201ENST00000520656 1514 ntBASIC18.52■□□□□ 0.56
ATP6V1AP38606 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
ATP6V1AP38606 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ATP6V1AP38606 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATP6V1AP38606 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATP6V1AP38606 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATP6V1AP38606 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
ATP6V1AP38606 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC18.52■□□□□ 0.55
ATP6V1AP38606 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATP6V1AP38606 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATP6V1AP38606 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ATP6V1AP38606 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATP6V1AP38606 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.52■□□□□ 0.55
ATP6V1AP38606 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.51■□□□□ 0.55
ATP6V1AP38606 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V1AP38606 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ATP6V1AP38606 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V1AP38606 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V1AP38606 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V1AP38606 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V1AP38606 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V1AP38606 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.51■□□□□ 0.55
ATP6V1AP38606 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V1AP38606 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V1AP38606 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
ATP6V1AP38606 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V1AP38606 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ATP6V1AP38606 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
ATP6V1AP38606 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC18.51■□□□□ 0.55
ATP6V1AP38606 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC18.51■□□□□ 0.55
ATP6V1AP38606 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC18.51■□□□□ 0.55
ATP6V1AP38606 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC18.51■□□□□ 0.55
ATP6V1AP38606 RGS5-216ENST00000449680 788 ntTSL 3 BASIC18.51■□□□□ 0.55
ATP6V1AP38606 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC18.51■□□□□ 0.55
ATP6V1AP38606 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V1AP38606 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC18.51■□□□□ 0.55
ATP6V1AP38606 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC18.51■□□□□ 0.55
ATP6V1AP38606 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC18.51■□□□□ 0.55
ATP6V1AP38606 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V1AP38606 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC18.51■□□□□ 0.55
ATP6V1AP38606 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC18.51■□□□□ 0.55
ATP6V1AP38606 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC18.51■□□□□ 0.55
ATP6V1AP38606 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V1AP38606 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V1AP38606 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V1AP38606 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V1AP38606 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ATP6V1AP38606 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ATP6V1AP38606 LINC00554-201ENST00000564841 3011 ntBASIC18.51■□□□□ 0.55
ATP6V1AP38606 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.51■□□□□ 0.55
ATP6V1AP38606 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V1AP38606 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V1AP38606 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
ATP6V1AP38606 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ATP6V1AP38606 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V1AP38606 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V1AP38606 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.51■□□□□ 0.55
ATP6V1AP38606 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V1AP38606 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V1AP38606 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.5■□□□□ 0.55
ATP6V1AP38606 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V1AP38606 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V1AP38606 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V1AP38606 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.5■□□□□ 0.55
ATP6V1AP38606 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V1AP38606 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
ATP6V1AP38606 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP6V1AP38606 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V1AP38606 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V1AP38606 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V1AP38606 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V1AP38606 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V1AP38606 PYY2-201ENST00000315776 282 ntBASIC18.5■□□□□ 0.55
ATP6V1AP38606 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ATP6V1AP38606 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V1AP38606 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC18.5■□□□□ 0.55
ATP6V1AP38606 SERF2-206ENST00000409291 807 ntTSL 3 BASIC18.5■□□□□ 0.55
ATP6V1AP38606 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V1AP38606 CELP-201ENST00000411440 1249 ntTSL 5 BASIC18.5■□□□□ 0.55
ATP6V1AP38606 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP6V1AP38606 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V1AP38606 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ATP6V1AP38606 ETV2-207ENST00000619399 994 ntTSL 5 BASIC18.5■□□□□ 0.55
ATP6V1AP38606 AC090386.2-201ENST00000623010 1039 ntBASIC18.5■□□□□ 0.55
ATP6V1AP38606 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC18.5■□□□□ 0.55
ATP6V1AP38606 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ATP6V1AP38606 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V1AP38606 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V1AP38606 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V1AP38606 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP6V1AP38606 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V1AP38606 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms