Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.55□□□□□ -0.08
CDH3P22223 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.55□□□□□ -0.08
CDH3P22223 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH3P22223 AC092658.1-201ENST00000505836 891 ntBASIC14.55□□□□□ -0.08
CDH3P22223 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.55□□□□□ -0.08
CDH3P22223 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.55□□□□□ -0.08
CDH3P22223 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.55□□□□□ -0.08
CDH3P22223 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
CDH3P22223 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.55□□□□□ -0.08
CDH3P22223 DUX4L47-201ENST00000566374 394 ntBASIC14.55□□□□□ -0.08
CDH3P22223 DUX4L45-201ENST00000566406 1057 ntBASIC14.55□□□□□ -0.08
CDH3P22223 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.55□□□□□ -0.08
CDH3P22223 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH3P22223 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH3P22223 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.55□□□□□ -0.08
CDH3P22223 AC067750.1-201ENST00000608826 6545 ntBASIC14.55□□□□□ -0.08
CDH3P22223 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH3P22223 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH3P22223 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH3P22223 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CDH3P22223 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CDH3P22223 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH3P22223 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CDH3P22223 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH3P22223 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.55□□□□□ -0.08
CDH3P22223 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH3P22223 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH3P22223 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CDH3P22223 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CDH3P22223 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH3P22223 AC027612.1-201ENST00000445234 2395 ntBASIC14.54□□□□□ -0.08
CDH3P22223 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH3P22223 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH3P22223 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH3P22223 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH3P22223 AC099521.3-201ENST00000624251 2938 ntBASIC14.54□□□□□ -0.08
CDH3P22223 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
CDH3P22223 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH3P22223 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.54□□□□□ -0.08
CDH3P22223 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.54□□□□□ -0.08
CDH3P22223 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CDH3P22223 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.54□□□□□ -0.08
CDH3P22223 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.54□□□□□ -0.08
CDH3P22223 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH3P22223 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.54□□□□□ -0.08
CDH3P22223 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.54□□□□□ -0.08
CDH3P22223 RN7SL560P-201ENST00000577943 264 ntBASIC14.54□□□□□ -0.08
CDH3P22223 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.54□□□□□ -0.08
CDH3P22223 TUBB1P2-201ENST00000422712 1306 ntBASIC14.54□□□□□ -0.08
CDH3P22223 TUBB1P1-201ENST00000503144 1300 ntBASIC14.54□□□□□ -0.08
CDH3P22223 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
CDH3P22223 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
CDH3P22223 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH3P22223 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH3P22223 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.54□□□□□ -0.08
CDH3P22223 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH3P22223 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH3P22223 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH3P22223 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CDH3P22223 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH3P22223 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CDH3P22223 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH3P22223 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH3P22223 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH3P22223 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CDH3P22223 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH3P22223 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
CDH3P22223 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH3P22223 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH3P22223 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH3P22223 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH3P22223 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CDH3P22223 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH3P22223 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH3P22223 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CDH3P22223 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CDH3P22223 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH3P22223 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH3P22223 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
CDH3P22223 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH3P22223 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH3P22223 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH3P22223 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH3P22223 AP000845.1-201ENST00000581677 2131 ntBASIC14.53□□□□□ -0.08
CDH3P22223 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH3P22223 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH3P22223 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH3P22223 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH3P22223 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH3P22223 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH3P22223 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH3P22223 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH3P22223 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH3P22223 WASH3P-207ENST00000560956 1394 ntBASIC14.53□□□□□ -0.08
CDH3P22223 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH3P22223 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH3P22223 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH3P22223 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.53□□□□□ -0.08
CDH3P22223 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CDH3P22223 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms