Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 HNRNPA1P5-201ENST00000558213 966 ntBASIC19.8■□□□□ 0.76
ATF3P18847 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC19.8■□□□□ 0.76
ATF3P18847 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC19.8■□□□□ 0.76
ATF3P18847 AL009176.1-201ENST00000607876 650 ntBASIC19.8■□□□□ 0.76
ATF3P18847 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATF3P18847 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ATF3P18847 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC19.8■□□□□ 0.76
ATF3P18847 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC19.8■□□□□ 0.76
ATF3P18847 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATF3P18847 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATF3P18847 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC19.8■□□□□ 0.76
ATF3P18847 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATF3P18847 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATF3P18847 LINC00528-201ENST00000600723 2160 ntBASIC19.8■□□□□ 0.76
ATF3P18847 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATF3P18847 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATF3P18847 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
ATF3P18847 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATF3P18847 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATF3P18847 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATF3P18847 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATF3P18847 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATF3P18847 AL365181.1-201ENST00000564032 1828 ntBASIC19.79■□□□□ 0.76
ATF3P18847 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATF3P18847 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATF3P18847 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATF3P18847 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATF3P18847 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATF3P18847 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
ATF3P18847 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATF3P18847 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATF3P18847 AP000244.1-201ENST00000424582 201 ntBASIC19.79■□□□□ 0.76
ATF3P18847 AC027612.2-202ENST00000445955 1199 ntBASIC19.79■□□□□ 0.76
ATF3P18847 AC092896.1-201ENST00000465850 380 ntBASIC19.79■□□□□ 0.76
ATF3P18847 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC19.79■□□□□ 0.76
ATF3P18847 TYMSP2-201ENST00000589501 424 ntBASIC19.79■□□□□ 0.76
ATF3P18847 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC19.79■□□□□ 0.76
ATF3P18847 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC19.79■□□□□ 0.76
ATF3P18847 PHF23-213ENST00000613632 850 ntTSL 5 BASIC19.79■□□□□ 0.76
ATF3P18847 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC19.79■□□□□ 0.76
ATF3P18847 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATF3P18847 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATF3P18847 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATF3P18847 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATF3P18847 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATF3P18847 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC19.79■□□□□ 0.76
ATF3P18847 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC19.79■□□□□ 0.76
ATF3P18847 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.79■□□□□ 0.76
ATF3P18847 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
ATF3P18847 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.78■□□□□ 0.76
ATF3P18847 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATF3P18847 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATF3P18847 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ATF3P18847 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC19.78■□□□□ 0.76
ATF3P18847 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATF3P18847 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC19.78■□□□□ 0.76
ATF3P18847 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ATF3P18847 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATF3P18847 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATF3P18847 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATF3P18847 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC19.78■□□□□ 0.76
ATF3P18847 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ATF3P18847 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC19.78■□□□□ 0.76
ATF3P18847 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATF3P18847 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATF3P18847 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
ATF3P18847 BX679664.3-201ENST00000414070 555 ntBASIC19.78■□□□□ 0.76
ATF3P18847 NRADDP-201ENST00000437305 691 ntBASIC19.78■□□□□ 0.76
ATF3P18847 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATF3P18847 AC113935.1-201ENST00000471722 555 ntBASIC19.78■□□□□ 0.76
ATF3P18847 PRSS3P1-201ENST00000503996 742 ntBASIC19.78■□□□□ 0.76
ATF3P18847 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC19.78■□□□□ 0.76
ATF3P18847 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC19.78■□□□□ 0.76
ATF3P18847 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC19.78■□□□□ 0.76
ATF3P18847 AL132994.1-201ENST00000554098 400 ntBASIC19.78■□□□□ 0.76
ATF3P18847 DLK1-205ENST00000556051 469 ntTSL 2 BASIC19.78■□□□□ 0.76
ATF3P18847 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC19.78■□□□□ 0.76
ATF3P18847 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
ATF3P18847 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATF3P18847 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATF3P18847 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATF3P18847 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ATF3P18847 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.78■□□□□ 0.76
ATF3P18847 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATF3P18847 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATF3P18847 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATF3P18847 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATF3P18847 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATF3P18847 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATF3P18847 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATF3P18847 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC19.78■□□□□ 0.76
ATF3P18847 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
ATF3P18847 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATF3P18847 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATF3P18847 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.77■□□□□ 0.76
ATF3P18847 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ATF3P18847 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.77■□□□□ 0.76
ATF3P18847 AC015688.4-201ENST00000580780 1647 ntBASIC19.77■□□□□ 0.76
ATF3P18847 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.77■□□□□ 0.76
ATF3P18847 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms