Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RARAP10276 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RARAP10276 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.48■□□□□ 0.07
RARAP10276 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.48■□□□□ 0.07
RARAP10276 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RARAP10276 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RARAP10276 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.48■□□□□ 0.07
RARAP10276 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RARAP10276 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RARAP10276 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.48■□□□□ 0.07
RARAP10276 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RARAP10276 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RARAP10276 AL512384.1-201ENST00000406683 331 ntBASIC15.48■□□□□ 0.07
RARAP10276 BCRP2-202ENST00000447763 634 ntBASIC15.48■□□□□ 0.07
RARAP10276 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.48■□□□□ 0.07
RARAP10276 FTLP10-202ENST00000505798 471 ntBASIC15.48■□□□□ 0.07
RARAP10276 BCRP6-201ENST00000510112 632 ntBASIC15.48■□□□□ 0.07
RARAP10276 BCRP7-201ENST00000511549 544 ntBASIC15.48■□□□□ 0.07
RARAP10276 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
RARAP10276 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.48■□□□□ 0.07
RARAP10276 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RARAP10276 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
RARAP10276 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RARAP10276 MIR600HG-201ENST00000449175 5984 ntBASIC15.48■□□□□ 0.07
RARAP10276 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RARAP10276 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RARAP10276 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RARAP10276 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RARAP10276 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RARAP10276 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RARAP10276 KRT8P24-201ENST00000560290 1559 ntBASIC15.48■□□□□ 0.07
RARAP10276 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RARAP10276 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RARAP10276 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RARAP10276 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RARAP10276 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
RARAP10276 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.48■□□□□ 0.07
RARAP10276 GALC-206ENST00000544807 2528 ntTSL 2 BASIC15.48■□□□□ 0.07
RARAP10276 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RARAP10276 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RARAP10276 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RARAP10276 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.48■□□□□ 0.07
RARAP10276 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RARAP10276 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RARAP10276 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
RARAP10276 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RARAP10276 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RARAP10276 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RARAP10276 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RARAP10276 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RARAP10276 TCAF1P1-201ENST00000414990 2232 ntBASIC15.47■□□□□ 0.07
RARAP10276 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RARAP10276 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC15.47■□□□□ 0.07
RARAP10276 TPM3P8-201ENST00000330554 643 ntBASIC15.47■□□□□ 0.07
RARAP10276 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RARAP10276 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RARAP10276 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RARAP10276 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.47■□□□□ 0.07
RARAP10276 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.47■□□□□ 0.07
RARAP10276 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.47■□□□□ 0.07
RARAP10276 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.47■□□□□ 0.07
RARAP10276 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RARAP10276 TTTY23B-201ENST00000442790 549 ntBASIC15.47■□□□□ 0.07
RARAP10276 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RARAP10276 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RARAP10276 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.47■□□□□ 0.07
RARAP10276 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.47■□□□□ 0.07
RARAP10276 ECM1P1-201ENST00000604092 1279 ntBASIC15.47■□□□□ 0.07
RARAP10276 IGHV3-72-202ENST00000621503 303 ntBASIC15.47■□□□□ 0.07
RARAP10276 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.47■□□□□ 0.07
RARAP10276 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.47■□□□□ 0.07
RARAP10276 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RARAP10276 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RARAP10276 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
RARAP10276 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RARAP10276 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RARAP10276 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RARAP10276 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RARAP10276 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RARAP10276 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RARAP10276 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RARAP10276 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RARAP10276 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RARAP10276 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC15.46■□□□□ 0.07
RARAP10276 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC15.46■□□□□ 0.07
RARAP10276 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RARAP10276 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
RARAP10276 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RARAP10276 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.46■□□□□ 0.07
RARAP10276 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.46■□□□□ 0.07
RARAP10276 AC215219.1-201ENST00000400706 1817 ntBASIC15.46■□□□□ 0.07
RARAP10276 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RARAP10276 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
RARAP10276 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
RARAP10276 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RARAP10276 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.46■□□□□ 0.07
RARAP10276 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RARAP10276 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
RARAP10276 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.46■□□□□ 0.07
RARAP10276 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 315.1 ms