Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TPM3P06753 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.59■□□□□ 0.25
TPM3P06753 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TPM3P06753 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TPM3P06753 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TPM3P06753 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TPM3P06753 SON-203ENST00000381679 7860 ntTSL 5 BASIC16.59■□□□□ 0.25
TPM3P06753 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TPM3P06753 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TPM3P06753 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TPM3P06753 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TPM3P06753 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
TPM3P06753 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC16.59■□□□□ 0.25
TPM3P06753 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TPM3P06753 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.59■□□□□ 0.25
TPM3P06753 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TPM3P06753 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TPM3P06753 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TPM3P06753 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
TPM3P06753 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
TPM3P06753 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC16.58■□□□□ 0.25
TPM3P06753 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC16.58■□□□□ 0.25
TPM3P06753 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
TPM3P06753 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TPM3P06753 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TPM3P06753 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.58■□□□□ 0.24
TPM3P06753 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.58■□□□□ 0.24
TPM3P06753 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.58■□□□□ 0.24
TPM3P06753 POLD2P1-201ENST00000511220 997 ntBASIC16.58■□□□□ 0.24
TPM3P06753 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TPM3P06753 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.58■□□□□ 0.24
TPM3P06753 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.58■□□□□ 0.24
TPM3P06753 AC010336.2-201ENST00000564226 506 ntBASIC16.58■□□□□ 0.24
TPM3P06753 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.58■□□□□ 0.24
TPM3P06753 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TPM3P06753 MIR6074-201ENST00000612054 107 ntBASIC16.58■□□□□ 0.24
TPM3P06753 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.58■□□□□ 0.24
TPM3P06753 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TPM3P06753 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.58■□□□□ 0.24
TPM3P06753 CLK3P2-201ENST00000427566 1453 ntBASIC16.58■□□□□ 0.24
TPM3P06753 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TPM3P06753 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.58■□□□□ 0.24
TPM3P06753 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TPM3P06753 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.58■□□□□ 0.24
TPM3P06753 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.58■□□□□ 0.24
TPM3P06753 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TPM3P06753 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TPM3P06753 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TPM3P06753 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC16.57■□□□□ 0.24
TPM3P06753 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPM3P06753 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPM3P06753 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
TPM3P06753 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPM3P06753 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPM3P06753 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPM3P06753 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPM3P06753 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.57■□□□□ 0.24
TPM3P06753 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPM3P06753 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TPM3P06753 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPM3P06753 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC16.57■□□□□ 0.24
TPM3P06753 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TPM3P06753 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPM3P06753 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.57■□□□□ 0.24
TPM3P06753 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TPM3P06753 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.57■□□□□ 0.24
TPM3P06753 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPM3P06753 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPM3P06753 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPM3P06753 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPM3P06753 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPM3P06753 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPM3P06753 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.57■□□□□ 0.24
TPM3P06753 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.57■□□□□ 0.24
TPM3P06753 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
TPM3P06753 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.57■□□□□ 0.24
TPM3P06753 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.57■□□□□ 0.24
TPM3P06753 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.57■□□□□ 0.24
TPM3P06753 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.57■□□□□ 0.24
TPM3P06753 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TPM3P06753 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.57■□□□□ 0.24
TPM3P06753 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.57■□□□□ 0.24
TPM3P06753 TEX28P1-201ENST00000613479 1221 ntBASIC16.57■□□□□ 0.24
TPM3P06753 TEX28P2-201ENST00000617764 1221 ntBASIC16.57■□□□□ 0.24
TPM3P06753 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
TPM3P06753 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPM3P06753 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPM3P06753 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPM3P06753 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TPM3P06753 TP73-211ENST00000604074 4806 ntTSL 5 BASIC16.57■□□□□ 0.24
TPM3P06753 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPM3P06753 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPM3P06753 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC16.57■□□□□ 0.24
TPM3P06753 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC16.57■□□□□ 0.24
TPM3P06753 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPM3P06753 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPM3P06753 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPM3P06753 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TPM3P06753 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM3P06753 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms