Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
O00370 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.73■□□□□ 0.11
O00370 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
O00370 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
O00370 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.73■□□□□ 0.11
O00370 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.73■□□□□ 0.11
O00370 PUDPP3-201ENST00000445368 636 ntBASIC15.73■□□□□ 0.11
O00370 HOMER2P2-201ENST00000451621 847 ntBASIC15.73■□□□□ 0.11
O00370 BNIP3P42-201ENST00000454982 569 ntBASIC15.73■□□□□ 0.11
O00370 DUX4L45-201ENST00000566406 1057 ntBASIC15.73■□□□□ 0.11
O00370 BNIP3P29-201ENST00000598302 571 ntBASIC15.73■□□□□ 0.11
O00370 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.73■□□□□ 0.11
O00370 AC011447.5-201ENST00000616168 564 ntBASIC15.73■□□□□ 0.11
O00370 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.73■□□□□ 0.11
O00370 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
O00370 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
O00370 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
O00370 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.73■□□□□ 0.11
O00370 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
O00370 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
O00370 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
O00370 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.73■□□□□ 0.11
O00370 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
O00370 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
O00370 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
O00370 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.73■□□□□ 0.11
O00370 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.73■□□□□ 0.11
O00370 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
O00370 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
O00370 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.73■□□□□ 0.11
O00370 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
O00370 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
O00370 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
O00370 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
O00370 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
O00370 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
O00370 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
O00370 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
O00370 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
O00370 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
O00370 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
O00370 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
O00370 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
O00370 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
O00370 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.72■□□□□ 0.11
O00370 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
O00370 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
O00370 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
O00370 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
O00370 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
O00370 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
O00370 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
O00370 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
O00370 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
O00370 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.72■□□□□ 0.11
O00370 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
O00370 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.72■□□□□ 0.11
O00370 YBX1P6-201ENST00000442962 1002 ntBASIC15.72■□□□□ 0.11
O00370 HIST2H2BB-201ENST00000449108 381 ntBASIC15.72■□□□□ 0.11
O00370 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
O00370 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.72■□□□□ 0.11
O00370 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.72■□□□□ 0.11
O00370 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
O00370 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
O00370 AL359183.1-201ENST00000623796 2132 ntBASIC15.72■□□□□ 0.11
O00370 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
O00370 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
O00370 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.72■□□□□ 0.11
O00370 AGGF1P1-201ENST00000509500 2073 ntBASIC15.72■□□□□ 0.11
O00370 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
O00370 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
O00370 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
O00370 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
O00370 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.72■□□□□ 0.11
O00370 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
O00370 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
O00370 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
O00370 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
O00370 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.72■□□□□ 0.11
O00370 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.72■□□□□ 0.11
O00370 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
O00370 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.71■□□□□ 0.11
O00370 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
O00370 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
O00370 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.71■□□□□ 0.11
O00370 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
O00370 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
O00370 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
O00370 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.71■□□□□ 0.11
O00370 AL928921.2-201ENST00000641325 2442 ntBASIC15.71■□□□□ 0.11
O00370 TPT1P11-201ENST00000458482 498 ntBASIC15.71■□□□□ 0.11
O00370 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.71■□□□□ 0.11
O00370 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.71■□□□□ 0.11
O00370 AC022447.6-201ENST00000515522 438 ntBASIC15.71■□□□□ 0.11
O00370 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.71■□□□□ 0.11
O00370 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.71■□□□□ 0.11
O00370 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.71■□□□□ 0.11
O00370 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.71■□□□□ 0.11
O00370 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.71■□□□□ 0.11
O00370 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms