Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC7O00311 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CDC7O00311 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDC7O00311 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.48□□□□□ -0.09
CDC7O00311 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.48□□□□□ -0.09
CDC7O00311 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.47□□□□□ -0.09
CDC7O00311 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 CICP4-201ENST00000447359 2812 ntBASIC14.47□□□□□ -0.09
CDC7O00311 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.47□□□□□ -0.09
CDC7O00311 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.47□□□□□ -0.09
CDC7O00311 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CDC7O00311 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.47□□□□□ -0.09
CDC7O00311 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CDC7O00311 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.47□□□□□ -0.09
CDC7O00311 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.47□□□□□ -0.09
CDC7O00311 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.47□□□□□ -0.09
CDC7O00311 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 FAM8A4P-201ENST00000435433 1213 ntBASIC14.47□□□□□ -0.09
CDC7O00311 PUDPP3-201ENST00000445368 636 ntBASIC14.47□□□□□ -0.09
CDC7O00311 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.47□□□□□ -0.09
CDC7O00311 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.47□□□□□ -0.09
CDC7O00311 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 MIR4683-201ENST00000579659 81 ntBASIC14.47□□□□□ -0.09
CDC7O00311 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.47□□□□□ -0.09
CDC7O00311 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.47□□□□□ -0.09
CDC7O00311 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.47□□□□□ -0.09
CDC7O00311 AL022328.1-201ENST00000610050 478 ntBASIC14.47□□□□□ -0.09
CDC7O00311 MIR6074-201ENST00000612054 107 ntBASIC14.47□□□□□ -0.09
CDC7O00311 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CDC7O00311 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CDC7O00311 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CDC7O00311 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CDC7O00311 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CDC7O00311 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CDC7O00311 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 AL590440.2-201ENST00000641973 1595 ntBASIC14.47□□□□□ -0.09
CDC7O00311 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CDC7O00311 SBF1P1-201ENST00000444527 5631 ntBASIC14.47□□□□□ -0.09
CDC7O00311 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC7O00311 MST1P2-201ENST00000457982 2291 ntBASIC14.46□□□□□ -0.09
CDC7O00311 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC7O00311 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC7O00311 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CDC7O00311 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.46□□□□□ -0.09
CDC7O00311 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC7O00311 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDC7O00311 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDC7O00311 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDC7O00311 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC7O00311 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC7O00311 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.46□□□□□ -0.09
CDC7O00311 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC7O00311 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC7O00311 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CDC7O00311 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CDC7O00311 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC7O00311 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.46□□□□□ -0.09
CDC7O00311 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.46□□□□□ -0.09
CDC7O00311 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.46□□□□□ -0.09
CDC7O00311 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC7O00311 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC7O00311 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC7O00311 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.46□□□□□ -0.09
CDC7O00311 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC7O00311 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.46□□□□□ -0.09
CDC7O00311 AC004945.1-201ENST00000416738 983 ntBASIC14.46□□□□□ -0.09
CDC7O00311 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.46□□□□□ -0.09
CDC7O00311 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDC7O00311 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.46□□□□□ -0.09
CDC7O00311 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.46□□□□□ -0.09
CDC7O00311 ALG3P1-201ENST00000508806 1114 ntBASIC14.46□□□□□ -0.09
CDC7O00311 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDC7O00311 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms