Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 NDUFV2P1-201ENST00000596415 907 ntBASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 AC138649.2-201ENST00000615886 705 ntBASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 PPA1-206ENST00000625364 644 ntTSL 5 BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPA2E9PIF3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPA2E9PIF3 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPA2E9PIF3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPA2E9PIF3 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPA2E9PIF3 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPA2E9PIF3 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.46□□□□□ -0.26
NPIPA2E9PIF3 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.46□□□□□ -0.26
NPIPA2E9PIF3 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPA2E9PIF3 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NPIPA2E9PIF3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 KRT8P29-201ENST00000420409 1371 ntBASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 AC011840.2-201ENST00000563063 1520 ntBASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 AC009093.2-202ENST00000620513 2079 ntBASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 RN7SKP175-201ENST00000408472 289 ntBASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 RNMTL1P1-201ENST00000454103 560 ntBASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 AC005740.2-201ENST00000511085 419 ntBASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 AL358472.3-201ENST00000608147 415 ntBASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 AL023803.2-201ENST00000620080 638 ntBASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 AC023090.2-201ENST00000625182 2110 ntBASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms