Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
YJEFN3A6XGL0 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.3■□□□□ 0.04
YJEFN3A6XGL0 AC006122.1-201ENST00000493323 440 ntBASIC15.3■□□□□ 0.04
YJEFN3A6XGL0 HLA-J-204ENST00000495278 958 ntBASIC15.3■□□□□ 0.04
YJEFN3A6XGL0 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.3■□□□□ 0.04
YJEFN3A6XGL0 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.3■□□□□ 0.04
YJEFN3A6XGL0 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.3■□□□□ 0.04
YJEFN3A6XGL0 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.3■□□□□ 0.04
YJEFN3A6XGL0 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
YJEFN3A6XGL0 AC027237.1-201ENST00000560942 655 ntBASIC15.3■□□□□ 0.04
YJEFN3A6XGL0 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.3■□□□□ 0.04
YJEFN3A6XGL0 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
YJEFN3A6XGL0 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.3■□□□□ 0.04
YJEFN3A6XGL0 AC015802.1-201ENST00000588104 1449 ntBASIC15.3■□□□□ 0.04
YJEFN3A6XGL0 AC090164.2-201ENST00000611487 516 ntBASIC15.3■□□□□ 0.04
YJEFN3A6XGL0 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.3■□□□□ 0.04
YJEFN3A6XGL0 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
YJEFN3A6XGL0 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
YJEFN3A6XGL0 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
YJEFN3A6XGL0 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
YJEFN3A6XGL0 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 AC011498.7-201ENST00000624986 2027 ntBASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 KRT8P13-201ENST00000463294 1010 ntBASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 AC005740.2-201ENST00000511085 419 ntBASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 SORD2P-201ENST00000558556 1069 ntBASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 MIR3615-201ENST00000581999 87 ntBASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 AC244093.1-201ENST00000610837 814 ntBASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.29■□□□□ 0.04
YJEFN3A6XGL0 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 AL161772.1-201ENST00000610494 4412 ntBASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 MYO15B-237ENST00000642007 4893 ntBASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 BX640514.1-201ENST00000583223 1918 ntBASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 AC091804.1-201ENST00000486888 567 ntBASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 AC013355.1-201ENST00000562625 723 ntBASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 SNORD3B-2-202ENST00000571722 791 ntBASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 AP000346.4-201ENST00000614827 381 ntBASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 MIR6787-201ENST00000616675 61 ntBASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms