Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AL359219.1-201ENST00000556311 934 ntBASIC21.47■■□□□ 1.03
CDC42BPBQ9Y5S2 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC21.47■■□□□ 1.03
CDC42BPBQ9Y5S2 GPI-205ENST00000586425 1799 ntTSL 5 BASIC21.47■■□□□ 1.03
CDC42BPBQ9Y5S2 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDC42BPBQ9Y5S2 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDC42BPBQ9Y5S2 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC21.47■■□□□ 1.03
CDC42BPBQ9Y5S2 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDC42BPBQ9Y5S2 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDC42BPBQ9Y5S2 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CDC42BPBQ9Y5S2 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 AL357373.1-201ENST00000394974 322 ntBASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 ABCD1P4-201ENST00000399687 604 ntBASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 AF274858.1-201ENST00000406288 372 ntBASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 FAM21EP-201ENST00000417804 985 ntBASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 AL512310.5-201ENST00000551999 515 ntBASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 TYMSP2-201ENST00000589501 424 ntBASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 GGNBP1-204ENST00000613113 887 ntBASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42BPBQ9Y5S2 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
CDC42BPBQ9Y5S2 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
CDC42BPBQ9Y5S2 HPD-204ENST00000543163 1709 ntTSL 5 BASIC21.45■■□□□ 1.02
CDC42BPBQ9Y5S2 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC21.45■■□□□ 1.02
CDC42BPBQ9Y5S2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42BPBQ9Y5S2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42BPBQ9Y5S2 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC21.45■■□□□ 1.02
CDC42BPBQ9Y5S2 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC21.45■■□□□ 1.02
CDC42BPBQ9Y5S2 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC21.45■■□□□ 1.02
CDC42BPBQ9Y5S2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42BPBQ9Y5S2 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC21.45■■□□□ 1.02
CDC42BPBQ9Y5S2 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42BPBQ9Y5S2 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CDC42BPBQ9Y5S2 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CDC42BPBQ9Y5S2 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC21.45■■□□□ 1.02
CDC42BPBQ9Y5S2 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42BPBQ9Y5S2 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42BPBQ9Y5S2 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42BPBQ9Y5S2 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42BPBQ9Y5S2 AL080243.1-201ENST00000423293 1060 ntBASIC21.45■■□□□ 1.02
CDC42BPBQ9Y5S2 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC21.45■■□□□ 1.02
CDC42BPBQ9Y5S2 TPT1P11-201ENST00000458482 498 ntBASIC21.45■■□□□ 1.02
CDC42BPBQ9Y5S2 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC21.45■■□□□ 1.02
CDC42BPBQ9Y5S2 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42BPBQ9Y5S2 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC21.45■■□□□ 1.02
CDC42BPBQ9Y5S2 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42BPBQ9Y5S2 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42BPBQ9Y5S2 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
CDC42BPBQ9Y5S2 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42BPBQ9Y5S2 AC004554.1-201ENST00000422830 1468 ntBASIC21.45■■□□□ 1.02
CDC42BPBQ9Y5S2 TCAF2P1-201ENST00000291129 2421 ntBASIC21.45■■□□□ 1.02
CDC42BPBQ9Y5S2 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42BPBQ9Y5S2 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42BPBQ9Y5S2 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDC42BPBQ9Y5S2 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC21.44■■□□□ 1.02
CDC42BPBQ9Y5S2 AC073347.1-201ENST00000421633 2643 ntBASIC21.44■■□□□ 1.02
CDC42BPBQ9Y5S2 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDC42BPBQ9Y5S2 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC21.44■■□□□ 1.02
CDC42BPBQ9Y5S2 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC21.44■■□□□ 1.02
CDC42BPBQ9Y5S2 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDC42BPBQ9Y5S2 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC21.44■■□□□ 1.02
CDC42BPBQ9Y5S2 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC21.44■■□□□ 1.02
CDC42BPBQ9Y5S2 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC21.44■■□□□ 1.02
CDC42BPBQ9Y5S2 SEPHS2P1-201ENST00000511618 1162 ntBASIC21.44■■□□□ 1.02
CDC42BPBQ9Y5S2 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC21.44■■□□□ 1.02
CDC42BPBQ9Y5S2 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CDC42BPBQ9Y5S2 AL591424.3-201ENST00000614278 872 ntBASIC21.44■■□□□ 1.02
CDC42BPBQ9Y5S2 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDC42BPBQ9Y5S2 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDC42BPBQ9Y5S2 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDC42BPBQ9Y5S2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDC42BPBQ9Y5S2 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms