Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TRAPPC1Q9Y5R8 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TRAPPC1Q9Y5R8 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRAPPC1Q9Y5R8 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC11.18□□□□□ -0.62
TRAPPC1Q9Y5R8 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC11.18□□□□□ -0.62
TRAPPC1Q9Y5R8 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRAPPC1Q9Y5R8 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
TRAPPC1Q9Y5R8 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
TRAPPC1Q9Y5R8 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC11.18□□□□□ -0.62
TRAPPC1Q9Y5R8 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRAPPC1Q9Y5R8 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRAPPC1Q9Y5R8 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC11.18□□□□□ -0.62
TRAPPC1Q9Y5R8 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TRAPPC1Q9Y5R8 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRAPPC1Q9Y5R8 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
TRAPPC1Q9Y5R8 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRAPPC1Q9Y5R8 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TRAPPC1Q9Y5R8 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRAPPC1Q9Y5R8 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC11.18□□□□□ -0.62
TRAPPC1Q9Y5R8 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRAPPC1Q9Y5R8 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 PRORSD1P-201ENST00000295112 541 ntBASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 PPIH-202ENST00000372549 327 ntTSL 3 BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 AL391647.1-201ENST00000395664 511 ntBASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 FAM185BP-201ENST00000443595 716 ntBASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 AC098859.1-201ENST00000502915 1238 ntBASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 MTDHP4-201ENST00000600287 670 ntBASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 FAM90A11P-201ENST00000518378 2218 ntBASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 AC060814.4-201ENST00000594169 2163 ntBASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TRAPPC1Q9Y5R8 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 F2-205ENST00000530231 1849 ntTSL 5 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 AC009474.1-201ENST00000455096 1565 ntBASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms