Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 AL079307.3-201ENST00000556114 283 ntBASIC13.99□□□□□ -0.17
AP4S1Q9Y587 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 AC000095.1-201ENST00000603208 874 ntBASIC13.99□□□□□ -0.17
AP4S1Q9Y587 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 AL118506.1-201ENST00000601296 3082 ntBASIC13.99□□□□□ -0.17
AP4S1Q9Y587 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
AP4S1Q9Y587 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 NCLP1-201ENST00000445357 1963 ntBASIC13.98□□□□□ -0.17
AP4S1Q9Y587 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 AC104692.2-201ENST00000603054 253 ntBASIC13.98□□□□□ -0.17
AP4S1Q9Y587 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.98□□□□□ -0.17
AP4S1Q9Y587 AC007967.4-201ENST00000614700 386 ntBASIC13.98□□□□□ -0.17
AP4S1Q9Y587 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
AP4S1Q9Y587 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 AL033527.5-202ENST00000641632 1098 ntBASIC13.97□□□□□ -0.17
AP4S1Q9Y587 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP4S1Q9Y587 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP4S1Q9Y587 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms