Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 RNVU1-8-201ENST00000364272 125 ntBASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 FOXN3-AS2-201ENST00000554071 1262 ntBASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 MT2A-202ENST00000561491 581 ntTSL 2 BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 AC022532.1-201ENST00000624563 1728 ntBASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 FUCA1P1-201ENST00000374476 1351 ntBASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 WASH7P-201ENST00000488147 1351 ntBASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 AC007292.2-201ENST00000593524 1812 ntBASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 LINC02447-202ENST00000501888 2146 ntBASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.59■□□□□ 0.41
ZC3H4Q9UPT8 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ZC3H4Q9UPT8 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ZC3H4Q9UPT8 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.58■□□□□ 0.41
ZC3H4Q9UPT8 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
ZC3H4Q9UPT8 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ZC3H4Q9UPT8 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ZC3H4Q9UPT8 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ZC3H4Q9UPT8 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ZC3H4Q9UPT8 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ZC3H4Q9UPT8 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.58■□□□□ 0.41
ZC3H4Q9UPT8 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ZC3H4Q9UPT8 AC009093.10-201ENST00000641956 1442 ntBASIC17.58■□□□□ 0.4
ZC3H4Q9UPT8 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZC3H4Q9UPT8 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZC3H4Q9UPT8 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZC3H4Q9UPT8 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZC3H4Q9UPT8 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZC3H4Q9UPT8 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZC3H4Q9UPT8 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZC3H4Q9UPT8 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZC3H4Q9UPT8 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC17.58■□□□□ 0.4
ZC3H4Q9UPT8 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC17.58■□□□□ 0.4
ZC3H4Q9UPT8 BCRP4-201ENST00000506079 804 ntBASIC17.58■□□□□ 0.4
ZC3H4Q9UPT8 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC17.58■□□□□ 0.4
ZC3H4Q9UPT8 CASP3-205ENST00000517513 964 ntTSL 5 BASIC17.58■□□□□ 0.4
ZC3H4Q9UPT8 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ZC3H4Q9UPT8 DRG2-220ENST00000583355 891 ntTSL 3 BASIC17.58■□□□□ 0.4
ZC3H4Q9UPT8 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC17.58■□□□□ 0.4
ZC3H4Q9UPT8 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC17.58■□□□□ 0.4
ZC3H4Q9UPT8 AP000769.1-203ENST00000637245 208 ntBASIC17.58■□□□□ 0.4
ZC3H4Q9UPT8 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
ZC3H4Q9UPT8 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZC3H4Q9UPT8 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
ZC3H4Q9UPT8 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZC3H4Q9UPT8 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZC3H4Q9UPT8 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.58■□□□□ 0.4
ZC3H4Q9UPT8 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ZC3H4Q9UPT8 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ZC3H4Q9UPT8 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZC3H4Q9UPT8 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.58■□□□□ 0.4
ZC3H4Q9UPT8 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZC3H4Q9UPT8 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZC3H4Q9UPT8 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms