Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHF8Q9UPP1 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
PHF8Q9UPP1 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PHF8Q9UPP1 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHF8Q9UPP1 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC19.66■□□□□ 0.74
PHF8Q9UPP1 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC19.66■□□□□ 0.74
PHF8Q9UPP1 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC19.66■□□□□ 0.74
PHF8Q9UPP1 GOLGA2P7-209ENST00000560408 745 ntBASIC19.66■□□□□ 0.74
PHF8Q9UPP1 GAS7-216ENST00000583882 553 ntTSL 5 BASIC19.66■□□□□ 0.74
PHF8Q9UPP1 AC018695.6-201ENST00000614011 534 ntBASIC19.66■□□□□ 0.74
PHF8Q9UPP1 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC19.66■□□□□ 0.74
PHF8Q9UPP1 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC19.66■□□□□ 0.74
PHF8Q9UPP1 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHF8Q9UPP1 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC19.66■□□□□ 0.74
PHF8Q9UPP1 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PHF8Q9UPP1 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHF8Q9UPP1 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.66■□□□□ 0.74
PHF8Q9UPP1 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHF8Q9UPP1 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.66■□□□□ 0.74
PHF8Q9UPP1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PHF8Q9UPP1 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHF8Q9UPP1 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PHF8Q9UPP1 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.65■□□□□ 0.74
PHF8Q9UPP1 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHF8Q9UPP1 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PHF8Q9UPP1 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC19.65■□□□□ 0.74
PHF8Q9UPP1 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.65■□□□□ 0.74
PHF8Q9UPP1 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHF8Q9UPP1 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHF8Q9UPP1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.65■□□□□ 0.74
PHF8Q9UPP1 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHF8Q9UPP1 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC19.65■□□□□ 0.74
PHF8Q9UPP1 AC006987.1-201ENST00000413610 527 ntBASIC19.65■□□□□ 0.74
PHF8Q9UPP1 ACTBP7-201ENST00000418351 1124 ntBASIC19.65■□□□□ 0.74
PHF8Q9UPP1 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC19.65■□□□□ 0.74
PHF8Q9UPP1 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PHF8Q9UPP1 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC19.65■□□□□ 0.74
PHF8Q9UPP1 AC005586.2-201ENST00000563946 837 ntBASIC19.65■□□□□ 0.74
PHF8Q9UPP1 TRMT112P3-201ENST00000580149 358 ntBASIC19.65■□□□□ 0.74
PHF8Q9UPP1 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC19.65■□□□□ 0.74
PHF8Q9UPP1 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PHF8Q9UPP1 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PHF8Q9UPP1 FUCA1P1-201ENST00000374476 1351 ntBASIC19.65■□□□□ 0.74
PHF8Q9UPP1 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC19.65■□□□□ 0.74
PHF8Q9UPP1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHF8Q9UPP1 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHF8Q9UPP1 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PHF8Q9UPP1 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHF8Q9UPP1 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
PHF8Q9UPP1 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHF8Q9UPP1 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PHF8Q9UPP1 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
PHF8Q9UPP1 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PHF8Q9UPP1 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PHF8Q9UPP1 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
PHF8Q9UPP1 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC19.64■□□□□ 0.74
PHF8Q9UPP1 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PHF8Q9UPP1 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHF8Q9UPP1 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC19.64■□□□□ 0.73
PHF8Q9UPP1 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC19.64■□□□□ 0.73
PHF8Q9UPP1 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC19.64■□□□□ 0.73
PHF8Q9UPP1 AC106047.2-201ENST00000511723 743 ntBASIC19.64■□□□□ 0.73
PHF8Q9UPP1 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC19.64■□□□□ 0.73
PHF8Q9UPP1 KLF17P1-201ENST00000547105 1126 ntBASIC19.64■□□□□ 0.73
PHF8Q9UPP1 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC19.64■□□□□ 0.73
PHF8Q9UPP1 AC145285.5-201ENST00000562217 361 ntBASIC19.64■□□□□ 0.73
PHF8Q9UPP1 SNORD3B-1-201ENST00000577988 758 ntBASIC19.64■□□□□ 0.73
PHF8Q9UPP1 AL139339.2-201ENST00000608063 657 ntBASIC19.64■□□□□ 0.73
PHF8Q9UPP1 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PHF8Q9UPP1 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC19.64■□□□□ 0.73
PHF8Q9UPP1 AC148477.9-201ENST00000623974 539 ntBASIC19.64■□□□□ 0.73
PHF8Q9UPP1 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
PHF8Q9UPP1 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHF8Q9UPP1 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHF8Q9UPP1 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PHF8Q9UPP1 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHF8Q9UPP1 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PHF8Q9UPP1 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
PHF8Q9UPP1 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC19.64■□□□□ 0.73
PHF8Q9UPP1 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHF8Q9UPP1 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHF8Q9UPP1 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PHF8Q9UPP1 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PHF8Q9UPP1 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PHF8Q9UPP1 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHF8Q9UPP1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHF8Q9UPP1 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHF8Q9UPP1 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
PHF8Q9UPP1 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHF8Q9UPP1 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
PHF8Q9UPP1 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC19.63■□□□□ 0.73
PHF8Q9UPP1 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHF8Q9UPP1 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHF8Q9UPP1 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHF8Q9UPP1 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC19.63■□□□□ 0.73
PHF8Q9UPP1 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHF8Q9UPP1 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHF8Q9UPP1 MSANTD2P1-201ENST00000445341 1368 ntBASIC19.63■□□□□ 0.73
PHF8Q9UPP1 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PHF8Q9UPP1 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms