Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
L1RE1Q9UN81 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
L1RE1Q9UN81 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
L1RE1Q9UN81 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
L1RE1Q9UN81 AHCYP2-201ENST00000430630 1300 ntBASIC16.17■□□□□ 0.18
L1RE1Q9UN81 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.17■□□□□ 0.18
L1RE1Q9UN81 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
L1RE1Q9UN81 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
L1RE1Q9UN81 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 RNA5SP412-201ENST00000516234 123 ntBASIC16.16■□□□□ 0.18
L1RE1Q9UN81 AL583810.1-201ENST00000553344 1045 ntBASIC16.16■□□□□ 0.18
L1RE1Q9UN81 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.16■□□□□ 0.18
L1RE1Q9UN81 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 YBX1P6-201ENST00000442962 1002 ntBASIC16.15■□□□□ 0.18
L1RE1Q9UN81 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 MYO15B-237ENST00000642007 4893 ntBASIC16.15■□□□□ 0.18
L1RE1Q9UN81 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
L1RE1Q9UN81 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
L1RE1Q9UN81 AL354989.2-201ENST00000435838 1540 ntBASIC16.14■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms