Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC18.38■□□□□ 0.53
SCN11AQ9UI33 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
SCN11AQ9UI33 AC073592.2-201ENST00000623062 780 ntBASIC18.38■□□□□ 0.53
SCN11AQ9UI33 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SCN11AQ9UI33 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.38■□□□□ 0.53
SCN11AQ9UI33 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN11AQ9UI33 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN11AQ9UI33 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC18.38■□□□□ 0.53
SCN11AQ9UI33 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SCN11AQ9UI33 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN11AQ9UI33 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC18.38■□□□□ 0.53
SCN11AQ9UI33 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN11AQ9UI33 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SCN11AQ9UI33 AL139158.3-201ENST00000641212 1562 ntBASIC18.38■□□□□ 0.53
SCN11AQ9UI33 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCN11AQ9UI33 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCN11AQ9UI33 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC18.37■□□□□ 0.53
SCN11AQ9UI33 AC091769.1-201ENST00000619576 568 ntBASIC18.37■□□□□ 0.53
SCN11AQ9UI33 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SCN11AQ9UI33 GOLGA8UP-201ENST00000527159 1755 ntBASIC18.37■□□□□ 0.53
SCN11AQ9UI33 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC18.37■□□□□ 0.53
SCN11AQ9UI33 CTBP2P8-201ENST00000422584 1330 ntBASIC18.37■□□□□ 0.53
SCN11AQ9UI33 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC18.37■□□□□ 0.53
SCN11AQ9UI33 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCN11AQ9UI33 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SCN11AQ9UI33 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCN11AQ9UI33 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCN11AQ9UI33 AC113367.3-201ENST00000508316 1912 ntBASIC18.37■□□□□ 0.53
SCN11AQ9UI33 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCN11AQ9UI33 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCN11AQ9UI33 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC18.37■□□□□ 0.53
SCN11AQ9UI33 ACTG1P19-201ENST00000418987 1116 ntBASIC18.37■□□□□ 0.53
SCN11AQ9UI33 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
SCN11AQ9UI33 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SCN11AQ9UI33 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SCN11AQ9UI33 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCN11AQ9UI33 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SCN11AQ9UI33 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCN11AQ9UI33 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC18.36■□□□□ 0.53
SCN11AQ9UI33 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCN11AQ9UI33 AC068760.1-201ENST00000493579 1953 ntBASIC18.36■□□□□ 0.53
SCN11AQ9UI33 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SCN11AQ9UI33 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SCN11AQ9UI33 AL022313.4-201ENST00000562756 2046 ntBASIC18.36■□□□□ 0.53
SCN11AQ9UI33 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC18.36■□□□□ 0.53
SCN11AQ9UI33 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC18.36■□□□□ 0.53
SCN11AQ9UI33 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCN11AQ9UI33 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCN11AQ9UI33 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCN11AQ9UI33 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCN11AQ9UI33 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SCN11AQ9UI33 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC18.36■□□□□ 0.53
SCN11AQ9UI33 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC18.36■□□□□ 0.53
SCN11AQ9UI33 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCN11AQ9UI33 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCN11AQ9UI33 MT2A-202ENST00000561491 581 ntTSL 2 BASIC18.36■□□□□ 0.53
SCN11AQ9UI33 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC18.36■□□□□ 0.53
SCN11AQ9UI33 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC18.36■□□□□ 0.53
SCN11AQ9UI33 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCN11AQ9UI33 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC18.36■□□□□ 0.53
SCN11AQ9UI33 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC18.36■□□□□ 0.53
SCN11AQ9UI33 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC18.36■□□□□ 0.53
SCN11AQ9UI33 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCN11AQ9UI33 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SCN11AQ9UI33 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SCN11AQ9UI33 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN11AQ9UI33 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN11AQ9UI33 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCN11AQ9UI33 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCN11AQ9UI33 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN11AQ9UI33 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCN11AQ9UI33 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCN11AQ9UI33 AC073210.1-201ENST00000414799 232 ntBASIC18.35■□□□□ 0.53
SCN11AQ9UI33 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN11AQ9UI33 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC18.35■□□□□ 0.53
SCN11AQ9UI33 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC18.35■□□□□ 0.53
SCN11AQ9UI33 AC226150.1-201ENST00000544259 466 ntBASIC18.35■□□□□ 0.53
SCN11AQ9UI33 VENTXP3-201ENST00000546480 773 ntBASIC18.35■□□□□ 0.53
SCN11AQ9UI33 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN11AQ9UI33 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN11AQ9UI33 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN11AQ9UI33 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCN11AQ9UI33 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC18.35■□□□□ 0.53
SCN11AQ9UI33 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN11AQ9UI33 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN11AQ9UI33 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN11AQ9UI33 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC18.35■□□□□ 0.53
SCN11AQ9UI33 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN11AQ9UI33 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN11AQ9UI33 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN11AQ9UI33 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN11AQ9UI33 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCN11AQ9UI33 GCSHP3-201ENST00000431120 391 ntBASIC18.35■□□□□ 0.53
SCN11AQ9UI33 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCN11AQ9UI33 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC18.35■□□□□ 0.53
SCN11AQ9UI33 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC18.35■□□□□ 0.53
SCN11AQ9UI33 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC18.35■□□□□ 0.53
SCN11AQ9UI33 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC18.35■□□□□ 0.53
SCN11AQ9UI33 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCN11AQ9UI33 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms