Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RIMBP3Q9UFD9 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC22.24■■□□□ 1.15
RIMBP3Q9UFD9 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
RIMBP3Q9UFD9 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
RIMBP3Q9UFD9 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
RIMBP3Q9UFD9 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC22.24■■□□□ 1.15
RIMBP3Q9UFD9 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC22.24■■□□□ 1.15
RIMBP3Q9UFD9 PTPA-219ENST00000435305 530 ntTSL 2 BASIC22.24■■□□□ 1.15
RIMBP3Q9UFD9 BICD1P1-201ENST00000457832 1222 ntBASIC22.24■■□□□ 1.15
RIMBP3Q9UFD9 PDLIM2-218ENST00000614502 599 ntTSL 2 BASIC22.24■■□□□ 1.15
RIMBP3Q9UFD9 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RIMBP3Q9UFD9 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RIMBP3Q9UFD9 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC22.23■■□□□ 1.15
RIMBP3Q9UFD9 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RIMBP3Q9UFD9 PTN-202ENST00000393083 1599 ntTSL 5 BASIC22.23■■□□□ 1.15
RIMBP3Q9UFD9 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC22.23■■□□□ 1.15
RIMBP3Q9UFD9 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RIMBP3Q9UFD9 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RIMBP3Q9UFD9 AC022784.6-203ENST00000520255 863 ntTSL 3 BASIC22.23■■□□□ 1.15
RIMBP3Q9UFD9 PTS-204ENST00000525803 625 ntTSL 3 BASIC22.23■■□□□ 1.15
RIMBP3Q9UFD9 AC044839.1-201ENST00000532307 541 ntTSL 5 BASIC22.23■■□□□ 1.15
RIMBP3Q9UFD9 AC009132.1-201ENST00000565194 320 ntBASIC22.23■■□□□ 1.15
RIMBP3Q9UFD9 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC22.23■■□□□ 1.15
RIMBP3Q9UFD9 LINC02427-202ENST00000605270 1059 ntTSL 2 BASIC22.23■■□□□ 1.15
RIMBP3Q9UFD9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RIMBP3Q9UFD9 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RIMBP3Q9UFD9 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RIMBP3Q9UFD9 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC22.22■■□□□ 1.15
RIMBP3Q9UFD9 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RIMBP3Q9UFD9 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
RIMBP3Q9UFD9 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
RIMBP3Q9UFD9 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RIMBP3Q9UFD9 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RIMBP3Q9UFD9 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC22.22■■□□□ 1.15
RIMBP3Q9UFD9 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RIMBP3Q9UFD9 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
RIMBP3Q9UFD9 RAB42P1-201ENST00000555078 316 ntBASIC22.22■■□□□ 1.15
RIMBP3Q9UFD9 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC22.22■■□□□ 1.15
RIMBP3Q9UFD9 AC133555.4-201ENST00000569081 152 ntBASIC22.22■■□□□ 1.15
RIMBP3Q9UFD9 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC22.22■■□□□ 1.15
RIMBP3Q9UFD9 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RIMBP3Q9UFD9 FAM90A27P-201ENST00000593323 1370 ntBASIC22.22■■□□□ 1.15
RIMBP3Q9UFD9 FAM90A28P-202ENST00000597191 1374 ntBASIC22.22■■□□□ 1.15
RIMBP3Q9UFD9 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RIMBP3Q9UFD9 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
RIMBP3Q9UFD9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.22■■□□□ 1.15
RIMBP3Q9UFD9 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RIMBP3Q9UFD9 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
RIMBP3Q9UFD9 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
RIMBP3Q9UFD9 AC015909.5-201ENST00000624336 2266 ntBASIC22.22■■□□□ 1.15
RIMBP3Q9UFD9 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
RIMBP3Q9UFD9 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
RIMBP3Q9UFD9 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RIMBP3Q9UFD9 RBP1-201ENST00000232219 898 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RIMBP3Q9UFD9 PHBP3-201ENST00000412562 819 ntBASIC22.21■■□□□ 1.15
RIMBP3Q9UFD9 RN7SL76P-201ENST00000482435 289 ntBASIC22.21■■□□□ 1.15
RIMBP3Q9UFD9 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
RIMBP3Q9UFD9 RPS23-205ENST00000510019 1019 ntTSL 4 BASIC22.21■■□□□ 1.15
RIMBP3Q9UFD9 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RIMBP3Q9UFD9 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC22.21■■□□□ 1.15
RIMBP3Q9UFD9 FTH1-205ENST00000529631 507 ntTSL 4 BASIC22.21■■□□□ 1.15
RIMBP3Q9UFD9 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
RIMBP3Q9UFD9 AC006547.1-206ENST00000600617 878 ntTSL 5 BASIC22.21■■□□□ 1.15
RIMBP3Q9UFD9 AC022296.3-201ENST00000608823 403 ntBASIC22.21■■□□□ 1.15
RIMBP3Q9UFD9 RBP1-206ENST00000617459 667 ntTSL 2 BASIC22.21■■□□□ 1.15
RIMBP3Q9UFD9 AL356583.1-201ENST00000398739 1371 ntBASIC22.21■■□□□ 1.15
RIMBP3Q9UFD9 STK16-202ENST00000409260 1493 ntTSL 5 BASIC22.21■■□□□ 1.15
RIMBP3Q9UFD9 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC22.21■■□□□ 1.15
RIMBP3Q9UFD9 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RIMBP3Q9UFD9 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RIMBP3Q9UFD9 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC22.21■■□□□ 1.15
RIMBP3Q9UFD9 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC22.21■■□□□ 1.15
RIMBP3Q9UFD9 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RIMBP3Q9UFD9 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
RIMBP3Q9UFD9 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RIMBP3Q9UFD9 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC22.21■■□□□ 1.15
RIMBP3Q9UFD9 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC22.21■■□□□ 1.15
RIMBP3Q9UFD9 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
RIMBP3Q9UFD9 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RIMBP3Q9UFD9 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
RIMBP3Q9UFD9 NRSN1-201ENST00000378475 800 ntTSL 3 BASIC22.2■■□□□ 1.15
RIMBP3Q9UFD9 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
RIMBP3Q9UFD9 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC22.2■■□□□ 1.15
RIMBP3Q9UFD9 RN7SL22P-201ENST00000471800 269 ntBASIC22.2■■□□□ 1.15
RIMBP3Q9UFD9 AP001979.1-201ENST00000529222 751 ntBASIC22.2■■□□□ 1.15
RIMBP3Q9UFD9 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC22.2■■□□□ 1.15
RIMBP3Q9UFD9 AC116036.2-201ENST00000607592 462 ntBASIC22.2■■□□□ 1.15
RIMBP3Q9UFD9 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
RIMBP3Q9UFD9 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RIMBP3Q9UFD9 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RIMBP3Q9UFD9 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC22.2■■□□□ 1.14
RIMBP3Q9UFD9 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RIMBP3Q9UFD9 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RIMBP3Q9UFD9 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC22.2■■□□□ 1.14
RIMBP3Q9UFD9 TFAM-201ENST00000373895 973 ntTSL 2 BASIC22.2■■□□□ 1.14
RIMBP3Q9UFD9 RPSAP16-201ENST00000447583 821 ntBASIC22.2■■□□□ 1.14
RIMBP3Q9UFD9 AC007405.2-203ENST00000455988 547 ntTSL 4 BASIC22.2■■□□□ 1.14
RIMBP3Q9UFD9 AC079250.1-201ENST00000456046 531 ntBASIC22.2■■□□□ 1.14
RIMBP3Q9UFD9 YBX1P3-201ENST00000468366 909 ntBASIC22.2■■□□□ 1.14
RIMBP3Q9UFD9 FP325317.1-201ENST00000539936 1042 ntBASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms