Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 ABCA8-201ENST00000269080 5677 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 AC023449.2-201ENST00000620538 2400 ntBASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 DGKZP1-201ENST00000378718 2776 ntBASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 C3orf35-201ENST00000328376 1859 ntAPPRIS P5 TSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 SLC4A5-202ENST00000358683 3142 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 SLC5A11-208ENST00000565769 2214 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 UNC13D-202ENST00000412096 3648 ntTSL 2 BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 MYO18A-202ENST00000527372 9992 ntAPPRIS P4 TSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 TP53TG3B-201ENST00000341305 2034 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 UGT1A3-201ENST00000482026 2364 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 ADAMTS20-204ENST00000553158 4633 ntTSL 5 BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 GPR26-201ENST00000284674 7514 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 PRAMENP-201ENST00000337471 3038 ntTSL 2 BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 ST5-230ENST00000530438 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 GOLGA4-201ENST00000356847 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 TEX13D-201ENST00000632372 4203 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 CCDC144B-208ENST00000618081 8688 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 JPT2-206ENST00000562684 3185 ntTSL 2 BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 LRTM2-201ENST00000299194 3688 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 ERCC2-204ENST00000391945 4153 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 MIR572-201ENST00000384983 95 ntBASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 GPX1P1-201ENST00000388829 606 ntBASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 AC096633.1-201ENST00000422446 749 ntBASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 AC005014.1-201ENST00000432006 2976 ntBASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 RARRES2P4-201ENST00000514074 484 ntBASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 AC111152.3-201ENST00000569699 673 ntBASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 MIR7108-201ENST00000614319 87 ntBASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 TRPV1-204ENST00000425167 2607 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 FLVCR2-201ENST00000238667 3632 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 ZNF641-203ENST00000544117 7819 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 MASP2-201ENST00000400897 2439 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 PMPCAP1-201ENST00000508114 1576 ntBASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 AC007787.1-201ENST00000588095 1583 ntBASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 CNTROB-202ENST00000563694 3705 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 LRRFIP1P1-201ENST00000498774 2246 ntBASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 DNASE1L1-205ENST00000369809 3008 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 ASIC2-202ENST00000359872 3179 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 CSF3R-202ENST00000361632 2847 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 RPS10P7-201ENST00000441932 2329 ntTSL 2 BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 SIN3A-208ENST00000567289 4078 ntTSL 2 BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 AC092902.5-201ENST00000641650 3256 ntBASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 ISL1-201ENST00000230658 2459 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 CADM1-212ENST00000542447 4223 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CDC42SE1Q9NRR8 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 CHRNB1-208ENST00000576360 1837 ntTSL 3 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 CDC45-201ENST00000263201 1976 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 FXR1-207ENST00000468861 1989 ntTSL 2 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 UNC45A-201ENST00000394275 4002 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 ZNF423-207ENST00000567169 4017 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 TACC2-228ENST00000515273 9245 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 MAP3K14-201ENST00000344686 4460 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 SPATA3-AS1-201ENST00000414876 3508 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 GFI1B-201ENST00000339463 2449 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 TACC1-211ENST00000520973 2564 ntTSL 2 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 DNMT3B-201ENST00000201963 4255 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 PTK2B-203ENST00000397501 4719 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 ARMC8-201ENST00000358441 3181 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 ANKRD34A-201ENST00000606888 3613 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 DDAH1-201ENST00000284031 3920 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 SLCO2A1-201ENST00000310926 4223 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 SEMA4G-205ENST00000517724 2675 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 SLC18A1-205ENST00000440926 2956 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 FAM47DP-201ENST00000402340 3290 ntBASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 AC111182.1-201ENST00000588701 3419 ntBASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 SPRTN-204ENST00000391858 3559 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 BRD1-202ENST00000404034 4312 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CDC42SE1Q9NRR8 ZMAT3-201ENST00000311417 9406 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms