Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VTA1Q9NP79 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VTA1Q9NP79 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VTA1Q9NP79 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VTA1Q9NP79 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.33■□□□□ 0.2
VTA1Q9NP79 PFN2-202ENST00000423691 911 ntTSL 2 BASIC16.33■□□□□ 0.2
VTA1Q9NP79 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.33■□□□□ 0.2
VTA1Q9NP79 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC16.33■□□□□ 0.2
VTA1Q9NP79 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.33■□□□□ 0.2
VTA1Q9NP79 RN7SL277P-201ENST00000481521 288 ntBASIC16.33■□□□□ 0.2
VTA1Q9NP79 ORAOV1P1-201ENST00000503108 395 ntBASIC16.33■□□□□ 0.2
VTA1Q9NP79 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC16.33■□□□□ 0.2
VTA1Q9NP79 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC16.33■□□□□ 0.2
VTA1Q9NP79 MIR4649-201ENST00000582839 64 ntBASIC16.33■□□□□ 0.2
VTA1Q9NP79 AP001065.2-201ENST00000617205 644 ntBASIC16.33■□□□□ 0.2
VTA1Q9NP79 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.33■□□□□ 0.2
VTA1Q9NP79 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
VTA1Q9NP79 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
VTA1Q9NP79 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.33■□□□□ 0.2
VTA1Q9NP79 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VTA1Q9NP79 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
VTA1Q9NP79 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VTA1Q9NP79 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VTA1Q9NP79 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.33■□□□□ 0.2
VTA1Q9NP79 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VTA1Q9NP79 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VTA1Q9NP79 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
VTA1Q9NP79 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
VTA1Q9NP79 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VTA1Q9NP79 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VTA1Q9NP79 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VTA1Q9NP79 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VTA1Q9NP79 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VTA1Q9NP79 AC006486.2-201ENST00000624246 2199 ntBASIC16.33■□□□□ 0.2
VTA1Q9NP79 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
VTA1Q9NP79 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
VTA1Q9NP79 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VTA1Q9NP79 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VTA1Q9NP79 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VTA1Q9NP79 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VTA1Q9NP79 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VTA1Q9NP79 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VTA1Q9NP79 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
VTA1Q9NP79 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VTA1Q9NP79 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VTA1Q9NP79 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VTA1Q9NP79 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VTA1Q9NP79 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VTA1Q9NP79 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.32■□□□□ 0.2
VTA1Q9NP79 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VTA1Q9NP79 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.32■□□□□ 0.2
VTA1Q9NP79 AC092580.1-201ENST00000433998 658 ntBASIC16.32■□□□□ 0.2
VTA1Q9NP79 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC16.32■□□□□ 0.2
VTA1Q9NP79 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
VTA1Q9NP79 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VTA1Q9NP79 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
VTA1Q9NP79 RPL18AP3-201ENST00000462885 528 ntBASIC16.32■□□□□ 0.2
VTA1Q9NP79 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.32■□□□□ 0.2
VTA1Q9NP79 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VTA1Q9NP79 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.32■□□□□ 0.2
VTA1Q9NP79 AC021016.3-201ENST00000608367 477 ntBASIC16.32■□□□□ 0.2
VTA1Q9NP79 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
VTA1Q9NP79 AP001184.1-201ENST00000637936 376 ntBASIC16.32■□□□□ 0.2
VTA1Q9NP79 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VTA1Q9NP79 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
VTA1Q9NP79 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VTA1Q9NP79 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
VTA1Q9NP79 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.31■□□□□ 0.2
VTA1Q9NP79 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VTA1Q9NP79 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VTA1Q9NP79 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
VTA1Q9NP79 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VTA1Q9NP79 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VTA1Q9NP79 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VTA1Q9NP79 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
VTA1Q9NP79 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC16.31■□□□□ 0.2
VTA1Q9NP79 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VTA1Q9NP79 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VTA1Q9NP79 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VTA1Q9NP79 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC16.31■□□□□ 0.2
VTA1Q9NP79 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.31■□□□□ 0.2
VTA1Q9NP79 MRPL22P1-201ENST00000505398 616 ntBASIC16.31■□□□□ 0.2
VTA1Q9NP79 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC16.31■□□□□ 0.2
VTA1Q9NP79 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VTA1Q9NP79 POLD4-208ENST00000532830 904 ntTSL 3 BASIC16.31■□□□□ 0.2
VTA1Q9NP79 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VTA1Q9NP79 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.31■□□□□ 0.2
VTA1Q9NP79 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.31■□□□□ 0.2
VTA1Q9NP79 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
VTA1Q9NP79 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
VTA1Q9NP79 AC140658.4-201ENST00000561990 352 ntBASIC16.31■□□□□ 0.2
VTA1Q9NP79 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC16.31■□□□□ 0.2
VTA1Q9NP79 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VTA1Q9NP79 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VTA1Q9NP79 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.31■□□□□ 0.2
VTA1Q9NP79 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VTA1Q9NP79 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VTA1Q9NP79 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VTA1Q9NP79 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.31■□□□□ 0.2
VTA1Q9NP79 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms