Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 USP17L6P-201ENST00000382470 1197 ntBASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 ISCA2P1-201ENST00000425548 448 ntBASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 MIR4706-201ENST00000582134 82 ntBASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 CICP16-201ENST00000502609 2813 ntBASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
KIAA1549Q9HCM3 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 AC015802.1-201ENST00000588104 1449 ntBASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 OR2K2-202ENST00000374428 1038 ntBASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 AC012441.2-201ENST00000444843 739 ntBASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 RTN3P1-201ENST00000536295 711 ntBASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 AC026803.1-201ENST00000569130 274 ntBASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 TUBB8P4-201ENST00000511806 1324 ntBASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 Z97180.1-201ENST00000445173 988 ntBASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 TMEM198B-204ENST00000484016 896 ntBASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 CU633904.3-201ENST00000624042 1029 ntBASIC12.98□□□□□ -0.33
KIAA1549Q9HCM3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms