Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 AC027237.1-201ENST00000560942 655 ntBASIC14.1□□□□□ -0.15
BRF2Q9HAW0 AC132938.2-201ENST00000579188 680 ntBASIC14.1□□□□□ -0.15
BRF2Q9HAW0 RN7SL713P-201ENST00000582127 302 ntBASIC14.1□□□□□ -0.15
BRF2Q9HAW0 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 AL591163.1-201ENST00000641757 987 ntBASIC14.1□□□□□ -0.15
BRF2Q9HAW0 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 AC011474.4-201ENST00000623523 2076 ntBASIC14.1□□□□□ -0.15
BRF2Q9HAW0 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 KRT8P28-201ENST00000433288 1390 ntBASIC14.09□□□□□ -0.15
BRF2Q9HAW0 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 KRT90P-201ENST00000549264 1064 ntBASIC14.09□□□□□ -0.15
BRF2Q9HAW0 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 AC138951.2-201ENST00000623455 1161 ntBASIC14.09□□□□□ -0.15
BRF2Q9HAW0 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 AL354989.2-201ENST00000435838 1540 ntBASIC14.09□□□□□ -0.15
BRF2Q9HAW0 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
BRF2Q9HAW0 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
BRF2Q9HAW0 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.15
BRF2Q9HAW0 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.08□□□□□ -0.15
BRF2Q9HAW0 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
BRF2Q9HAW0 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
BRF2Q9HAW0 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
BRF2Q9HAW0 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.15
BRF2Q9HAW0 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms