Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 AC090164.2-201ENST00000611487 516 ntBASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPAP1Q9BWH6 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 AC091046.1-201ENST00000331871 207 ntBASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 AC134698.3-201ENST00000523880 214 ntBASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 MIR4722-201ENST00000578292 60 ntBASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 MIR3907-201ENST00000579424 151 ntBASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 AL136295.7-201ENST00000619226 1200 ntBASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 AC079336.7-201ENST00000623428 1078 ntBASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 AC020910.5-201ENST00000623668 1865 ntBASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 INTS4P1-203ENST00000641008 3683 ntBASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 AC104581.4-201ENST00000623126 3052 ntBASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 MIR33B-201ENST00000385104 96 ntBASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 Z97180.1-201ENST00000445173 988 ntBASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 AC100827.2-201ENST00000563214 1194 ntBASIC17.79■□□□□ 0.44
RPAP1Q9BWH6 MIR4706-201ENST00000582134 82 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms