Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 AC093525.8-201ENST00000624099 1342 ntBASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 TP73-211ENST00000604074 4806 ntTSL 5 BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 AMT-232ENST00000636199 1546 ntTSL 5 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 AC018529.2-202ENST00000611482 3087 ntBASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 AC073957.3-201ENST00000609998 6758 ntBASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 HMGN1P19-201ENST00000436976 333 ntBASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 AC104596.2-201ENST00000512793 793 ntBASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 AL132655.2-201ENST00000596276 594 ntBASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 AC099568.2-201ENST00000609194 695 ntBASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 HFE2-206ENST00000634927 506 ntTSL 4 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 COL6A4P2-202ENST00000504443 2753 ntBASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 AC007541.1-201ENST00000570282 1469 ntBASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CHRDL1Q9BU40 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 REXO1L1P-201ENST00000379010 6598 ntBASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 INTS4P2-202ENST00000614726 2019 ntBASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms