Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.4□□□□□ -0.1
EBF4Q9BQW3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.4□□□□□ -0.1
EBF4Q9BQW3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
EBF4Q9BQW3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.4□□□□□ -0.1
EBF4Q9BQW3 AL049840.4-201ENST00000602422 811 ntBASIC14.4□□□□□ -0.1
EBF4Q9BQW3 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EBF4Q9BQW3 AL662799.1-202ENST00000614205 422 ntBASIC14.4□□□□□ -0.1
EBF4Q9BQW3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.4□□□□□ -0.1
EBF4Q9BQW3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.4□□□□□ -0.1
EBF4Q9BQW3 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
EBF4Q9BQW3 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
EBF4Q9BQW3 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
EBF4Q9BQW3 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
EBF4Q9BQW3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.4□□□□□ -0.1
EBF4Q9BQW3 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EBF4Q9BQW3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EBF4Q9BQW3 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EBF4Q9BQW3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
EBF4Q9BQW3 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EBF4Q9BQW3 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
EBF4Q9BQW3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
EBF4Q9BQW3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
EBF4Q9BQW3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
EBF4Q9BQW3 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
EBF4Q9BQW3 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC14.4□□□□□ -0.11
EBF4Q9BQW3 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 AC112482.1-201ENST00000492080 688 ntBASIC14.39□□□□□ -0.11
EBF4Q9BQW3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 AC010327.4-202ENST00000591484 748 ntBASIC14.39□□□□□ -0.11
EBF4Q9BQW3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 AC027612.4-201ENST00000605371 583 ntBASIC14.39□□□□□ -0.11
EBF4Q9BQW3 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.39□□□□□ -0.11
EBF4Q9BQW3 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.38□□□□□ -0.11
EBF4Q9BQW3 NUS1P3-201ENST00000423502 862 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms