Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VRK1Q99986 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.15□□□□□ -0.3
VRK1Q99986 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.15□□□□□ -0.3
VRK1Q99986 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.15□□□□□ -0.3
VRK1Q99986 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
VRK1Q99986 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.15□□□□□ -0.3
VRK1Q99986 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
VRK1Q99986 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VRK1Q99986 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VRK1Q99986 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
VRK1Q99986 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
VRK1Q99986 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.15□□□□□ -0.3
VRK1Q99986 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
VRK1Q99986 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VRK1Q99986 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VRK1Q99986 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VRK1Q99986 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
VRK1Q99986 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.15□□□□□ -0.3
VRK1Q99986 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VRK1Q99986 CICP8-201ENST00000455800 2813 ntBASIC13.15□□□□□ -0.3
VRK1Q99986 AL139385.1-201ENST00000611744 3272 ntBASIC13.15□□□□□ -0.3
VRK1Q99986 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.15□□□□□ -0.3
VRK1Q99986 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VRK1Q99986 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VRK1Q99986 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.15□□□□□ -0.3
VRK1Q99986 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VRK1Q99986 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.15□□□□□ -0.3
VRK1Q99986 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
VRK1Q99986 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
VRK1Q99986 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
VRK1Q99986 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.15□□□□□ -0.31
VRK1Q99986 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
VRK1Q99986 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
VRK1Q99986 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.14□□□□□ -0.31
VRK1Q99986 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VRK1Q99986 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VRK1Q99986 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VRK1Q99986 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
VRK1Q99986 PEG13-201ENST00000631594 5667 ntBASIC13.14□□□□□ -0.31
VRK1Q99986 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VRK1Q99986 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.14□□□□□ -0.31
VRK1Q99986 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.14□□□□□ -0.31
VRK1Q99986 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VRK1Q99986 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.14□□□□□ -0.31
VRK1Q99986 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
VRK1Q99986 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
VRK1Q99986 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VRK1Q99986 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.14□□□□□ -0.31
VRK1Q99986 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VRK1Q99986 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VRK1Q99986 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.14□□□□□ -0.31
VRK1Q99986 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.14□□□□□ -0.31
VRK1Q99986 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VRK1Q99986 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
VRK1Q99986 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VRK1Q99986 ACKR1-201ENST00000368121 1240 ntBASIC13.14□□□□□ -0.31
VRK1Q99986 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.14□□□□□ -0.31
VRK1Q99986 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VRK1Q99986 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.14□□□□□ -0.31
VRK1Q99986 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.14□□□□□ -0.31
VRK1Q99986 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.14□□□□□ -0.31
VRK1Q99986 HLA-V-201ENST00000429037 534 ntBASIC13.14□□□□□ -0.31
VRK1Q99986 BNIP3P42-201ENST00000454982 569 ntBASIC13.14□□□□□ -0.31
VRK1Q99986 AC119751.2-201ENST00000504529 210 ntBASIC13.14□□□□□ -0.31
VRK1Q99986 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.14□□□□□ -0.31
VRK1Q99986 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.14□□□□□ -0.31
VRK1Q99986 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.14□□□□□ -0.31
VRK1Q99986 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.14□□□□□ -0.31
VRK1Q99986 BNIP3P29-201ENST00000598302 571 ntBASIC13.14□□□□□ -0.31
VRK1Q99986 AC025181.2-201ENST00000606994 802 ntBASIC13.14□□□□□ -0.31
VRK1Q99986 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.14□□□□□ -0.31
VRK1Q99986 AC011447.5-201ENST00000616168 564 ntBASIC13.14□□□□□ -0.31
VRK1Q99986 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VRK1Q99986 MIR6799-201ENST00000620297 69 ntBASIC13.14□□□□□ -0.31
VRK1Q99986 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.14□□□□□ -0.31
VRK1Q99986 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VRK1Q99986 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VRK1Q99986 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
VRK1Q99986 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VRK1Q99986 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VRK1Q99986 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
VRK1Q99986 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.14□□□□□ -0.31
VRK1Q99986 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VRK1Q99986 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
VRK1Q99986 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
VRK1Q99986 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VRK1Q99986 AC023024.2-201ENST00000623561 1993 ntBASIC13.14□□□□□ -0.31
VRK1Q99986 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VRK1Q99986 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VRK1Q99986 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VRK1Q99986 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
VRK1Q99986 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
VRK1Q99986 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VRK1Q99986 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VRK1Q99986 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.13□□□□□ -0.31
VRK1Q99986 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
VRK1Q99986 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.13□□□□□ -0.31
VRK1Q99986 AL023775.1-201ENST00000454907 1746 ntBASIC13.13□□□□□ -0.31
VRK1Q99986 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.13□□□□□ -0.31
VRK1Q99986 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms