Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
COL21A1Q96P44 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.02□□□□□ -0.17
COL21A1Q96P44 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
COL21A1Q96P44 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
COL21A1Q96P44 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.02□□□□□ -0.17
COL21A1Q96P44 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.02□□□□□ -0.17
COL21A1Q96P44 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
COL21A1Q96P44 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.02□□□□□ -0.17
COL21A1Q96P44 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL21A1Q96P44 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
COL21A1Q96P44 MSTO2P-201ENST00000314835 1709 ntBASIC14.01□□□□□ -0.17
COL21A1Q96P44 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.01□□□□□ -0.17
COL21A1Q96P44 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
COL21A1Q96P44 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL21A1Q96P44 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL21A1Q96P44 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.01□□□□□ -0.17
COL21A1Q96P44 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL21A1Q96P44 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL21A1Q96P44 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.01□□□□□ -0.17
COL21A1Q96P44 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL21A1Q96P44 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL21A1Q96P44 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.01□□□□□ -0.17
COL21A1Q96P44 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL21A1Q96P44 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL21A1Q96P44 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL21A1Q96P44 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.01□□□□□ -0.17
COL21A1Q96P44 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.01□□□□□ -0.17
COL21A1Q96P44 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL21A1Q96P44 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
COL21A1Q96P44 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.01□□□□□ -0.17
COL21A1Q96P44 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.01□□□□□ -0.17
COL21A1Q96P44 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.01□□□□□ -0.17
COL21A1Q96P44 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.01□□□□□ -0.17
COL21A1Q96P44 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.01□□□□□ -0.17
COL21A1Q96P44 TPT1P11-201ENST00000458482 498 ntBASIC14.01□□□□□ -0.17
COL21A1Q96P44 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.01□□□□□ -0.17
COL21A1Q96P44 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.01□□□□□ -0.17
COL21A1Q96P44 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.01□□□□□ -0.17
COL21A1Q96P44 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.01□□□□□ -0.17
COL21A1Q96P44 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
COL21A1Q96P44 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.01□□□□□ -0.17
COL21A1Q96P44 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.01□□□□□ -0.17
COL21A1Q96P44 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
COL21A1Q96P44 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
COL21A1Q96P44 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL21A1Q96P44 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.01□□□□□ -0.17
COL21A1Q96P44 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL21A1Q96P44 AL354702.1-201ENST00000442006 1960 ntBASIC14.01□□□□□ -0.17
COL21A1Q96P44 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
COL21A1Q96P44 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
COL21A1Q96P44 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
COL21A1Q96P44 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.01□□□□□ -0.17
COL21A1Q96P44 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL21A1Q96P44 AC055811.4-201ENST00000624039 1754 ntBASIC14.01□□□□□ -0.17
COL21A1Q96P44 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL21A1Q96P44 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL21A1Q96P44 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL21A1Q96P44 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.01□□□□□ -0.17
COL21A1Q96P44 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL21A1Q96P44 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL21A1Q96P44 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.01□□□□□ -0.17
COL21A1Q96P44 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
COL21A1Q96P44 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL21A1Q96P44 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL21A1Q96P44 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL21A1Q96P44 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL21A1Q96P44 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
COL21A1Q96P44 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL21A1Q96P44 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL21A1Q96P44 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL21A1Q96P44 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14□□□□□ -0.17
COL21A1Q96P44 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL21A1Q96P44 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL21A1Q96P44 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL21A1Q96P44 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL21A1Q96P44 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL21A1Q96P44 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14□□□□□ -0.17
COL21A1Q96P44 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL21A1Q96P44 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
COL21A1Q96P44 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
COL21A1Q96P44 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14□□□□□ -0.17
COL21A1Q96P44 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL21A1Q96P44 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL21A1Q96P44 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14□□□□□ -0.17
COL21A1Q96P44 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14□□□□□ -0.17
COL21A1Q96P44 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
COL21A1Q96P44 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14□□□□□ -0.17
COL21A1Q96P44 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL21A1Q96P44 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL21A1Q96P44 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL21A1Q96P44 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
COL21A1Q96P44 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14□□□□□ -0.17
COL21A1Q96P44 AC005229.1-201ENST00000392885 409 ntBASIC14□□□□□ -0.17
COL21A1Q96P44 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14□□□□□ -0.17
COL21A1Q96P44 TMEM14DP-201ENST00000422205 345 ntBASIC14□□□□□ -0.17
COL21A1Q96P44 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
COL21A1Q96P44 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
COL21A1Q96P44 USP32P1-208ENST00000506594 1164 ntBASIC14□□□□□ -0.17
COL21A1Q96P44 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14□□□□□ -0.17
COL21A1Q96P44 AC022447.6-201ENST00000515522 438 ntBASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms