Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 HNRNPA1P32-201ENST00000396326 963 ntBASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 AC005740.2-201ENST00000511085 419 ntBASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 AC005730.2-201ENST00000564549 1184 ntBASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 RN7SL163P-201ENST00000583100 276 ntBASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 AC005324.6-201ENST00000587972 613 ntBASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 AC020914.3-201ENST00000594712 304 ntBASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 MIR6720-201ENST00000611664 98 ntBASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 AC013726.1-201ENST00000563747 2285 ntBASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 AC144831.1-201ENST00000573312 2656 ntBASIC11.43□□□□□ -0.58
UBE2E2Q96LR5 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 AL008718.2-201ENST00000609206 1313 ntBASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 FGD5P1-202ENST00000614866 2498 ntBASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 BNIP3P13-201ENST00000599968 566 ntBASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 AC244093.1-201ENST00000610837 814 ntBASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 AP000346.4-201ENST00000614827 381 ntBASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 MIR6787-201ENST00000616675 61 ntBASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2E2Q96LR5 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms