Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 AL157407.1-201ENST00000435784 904 ntBASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 VDAC1P1-201ENST00000439229 848 ntBASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 AC006335.1-201ENST00000445200 547 ntBASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 AC103988.2-201ENST00000561804 725 ntBASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 AL133499.1-201ENST00000596207 608 ntBASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 AL353726.2-201ENST00000623259 884 ntBASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 NAP1L6-202ENST00000641404 1222 ntBASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 Z98259.2-201ENST00000641583 609 ntBASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 DBET-201ENST00000630918 3363 ntBASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 AC126755.1-201ENST00000525846 6405 ntBASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 AC009093.10-201ENST00000641956 1442 ntBASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP6V0A1Q93050 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 AP002414.2-201ENST00000591780 3365 ntBASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 KRT8P28-201ENST00000433288 1390 ntBASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 AL596276.2-201ENST00000447525 331 ntBASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 EEF1DP6-201ENST00000449232 372 ntBASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 TMEM198B-204ENST00000484016 896 ntBASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 RCC2P8-201ENST00000502779 1035 ntBASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 AC090857.1-201ENST00000527400 390 ntBASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 AC009779.1-201ENST00000551138 283 ntBASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 AF254983.2-201ENST00000612331 135 ntBASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0A1Q93050 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 CICP14-201ENST00000629111 2732 ntBASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 FXNP2-201ENST00000411625 547 ntBASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms