Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
DDX1Q92499 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
DDX1Q92499 MIR1202-201ENST00000408529 83 ntBASIC15.66■□□□□ 0.1
DDX1Q92499 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
DDX1Q92499 HINT2P1-201ENST00000419438 481 ntBASIC15.66■□□□□ 0.1
DDX1Q92499 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.66■□□□□ 0.1
DDX1Q92499 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
DDX1Q92499 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.66■□□□□ 0.1
DDX1Q92499 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.66■□□□□ 0.1
DDX1Q92499 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
DDX1Q92499 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
DDX1Q92499 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.66■□□□□ 0.1
DDX1Q92499 AC023310.1-201ENST00000554836 735 ntBASIC15.66■□□□□ 0.1
DDX1Q92499 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
DDX1Q92499 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.66■□□□□ 0.1
DDX1Q92499 RHOXF1P1-202ENST00000635473 501 ntBASIC15.66■□□□□ 0.1
DDX1Q92499 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
DDX1Q92499 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
DDX1Q92499 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
DDX1Q92499 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
DDX1Q92499 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
DDX1Q92499 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
DDX1Q92499 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
DDX1Q92499 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
DDX1Q92499 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
DDX1Q92499 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DDX1Q92499 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DDX1Q92499 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
DDX1Q92499 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DDX1Q92499 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DDX1Q92499 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DDX1Q92499 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DDX1Q92499 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DDX1Q92499 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
DDX1Q92499 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.65■□□□□ 0.1
DDX1Q92499 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DDX1Q92499 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DDX1Q92499 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DDX1Q92499 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DDX1Q92499 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DDX1Q92499 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.65■□□□□ 0.1
DDX1Q92499 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DDX1Q92499 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DDX1Q92499 AC010141.1-201ENST00000411585 623 ntBASIC15.65■□□□□ 0.1
DDX1Q92499 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
DDX1Q92499 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.65■□□□□ 0.1
DDX1Q92499 CICP12-201ENST00000455801 843 ntBASIC15.65■□□□□ 0.1
DDX1Q92499 UPF3AP2-201ENST00000457924 1132 ntBASIC15.65■□□□□ 0.1
DDX1Q92499 AKR7A2P1-201ENST00000460134 915 ntBASIC15.65■□□□□ 0.1
DDX1Q92499 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.65■□□□□ 0.1
DDX1Q92499 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DDX1Q92499 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DDX1Q92499 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DDX1Q92499 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.65■□□□□ 0.1
DDX1Q92499 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.65■□□□□ 0.1
DDX1Q92499 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.65■□□□□ 0.1
DDX1Q92499 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.65■□□□□ 0.1
DDX1Q92499 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.65■□□□□ 0.1
DDX1Q92499 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.65■□□□□ 0.1
DDX1Q92499 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
DDX1Q92499 AC009542.2-202ENST00000619004 1067 ntBASIC15.65■□□□□ 0.1
DDX1Q92499 AC008687.7-202ENST00000637404 953 ntBASIC15.65■□□□□ 0.1
DDX1Q92499 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
DDX1Q92499 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DDX1Q92499 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.65■□□□□ 0.1
DDX1Q92499 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DDX1Q92499 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
DDX1Q92499 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.65■□□□□ 0.1
DDX1Q92499 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DDX1Q92499 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DDX1Q92499 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.65■□□□□ 0.1
DDX1Q92499 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
DDX1Q92499 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.65■□□□□ 0.1
DDX1Q92499 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DDX1Q92499 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DDX1Q92499 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
DDX1Q92499 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
DDX1Q92499 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.65■□□□□ 0.1
DDX1Q92499 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
DDX1Q92499 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.1
DDX1Q92499 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
DDX1Q92499 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
DDX1Q92499 HSPA8P5-201ENST00000456928 2069 ntBASIC15.64■□□□□ 0.09
DDX1Q92499 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
DDX1Q92499 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.64■□□□□ 0.09
DDX1Q92499 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.64■□□□□ 0.09
DDX1Q92499 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
DDX1Q92499 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
DDX1Q92499 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.64■□□□□ 0.09
DDX1Q92499 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
DDX1Q92499 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
DDX1Q92499 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.64■□□□□ 0.09
DDX1Q92499 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
DDX1Q92499 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
DDX1Q92499 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
DDX1Q92499 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
DDX1Q92499 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
DDX1Q92499 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
DDX1Q92499 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.64■□□□□ 0.09
DDX1Q92499 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms