Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 AL049840.4-201ENST00000602422 811 ntBASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 AL355385.1-201ENST00000606123 409 ntBASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 AC004233.3-201ENST00000607794 1269 ntBASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RTN4IP1Q8WWV3 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 INE2-201ENST00000630399 1874 ntBASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 AL391825.1-201ENST00000457671 1364 ntBASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 AC104596.2-201ENST00000512793 793 ntBASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 CICP8-201ENST00000455800 2813 ntBASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 AC130686.1-201ENST00000622936 2466 ntBASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RTN4IP1Q8WWV3 AC090505.1-201ENST00000430515 1834 ntBASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 KRT8P24-201ENST00000560290 1559 ntBASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 AC007541.1-201ENST00000570282 1469 ntBASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 DRD5P1-201ENST00000456605 1438 ntBASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RTN4IP1Q8WWV3 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms