Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM4Q8WVI0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 AGAP12P-201ENST00000585227 2359 ntBASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 SALL4P5-201ENST00000419001 1760 ntBASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 AC009474.1-201ENST00000455096 1565 ntBASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 AL080243.2-201ENST00000418783 582 ntBASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 AL353779.1-201ENST00000434793 351 ntBASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 KRT18P8-201ENST00000581937 1246 ntBASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 MARK2P9-201ENST00000430958 1727 ntBASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.62□□□□□ -0.39
SMIM4Q8WVI0 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 MEX3B-202ENST00000558133 4333 ntBASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 TLE1P1-201ENST00000422965 589 ntBASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 NT5C-211ENST00000582170 653 ntTSL 3 BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 AL023775.1-201ENST00000454907 1746 ntBASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms