Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 INTS4P1-203ENST00000641008 3683 ntBASIC13.15□□□□□ -0.3
RNF138Q8WVD3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 AC239868.1-201ENST00000369385 493 ntBASIC13.15□□□□□ -0.3
RNF138Q8WVD3 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 USP17L6P-201ENST00000382470 1197 ntBASIC13.15□□□□□ -0.3
RNF138Q8WVD3 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.15□□□□□ -0.3
RNF138Q8WVD3 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 SPTLC1P5-201ENST00000450718 252 ntBASIC13.15□□□□□ -0.3
RNF138Q8WVD3 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 AL139099.5-201ENST00000635274 300 ntBASIC13.15□□□□□ -0.3
RNF138Q8WVD3 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.15□□□□□ -0.3
RNF138Q8WVD3 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RNF138Q8WVD3 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
RNF138Q8WVD3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
RNF138Q8WVD3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
RNF138Q8WVD3 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.31
RNF138Q8WVD3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 ACTG1P2-201ENST00000415776 1125 ntBASIC13.14□□□□□ -0.31
RNF138Q8WVD3 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 ACTG1P11-201ENST00000425411 1125 ntBASIC13.14□□□□□ -0.31
RNF138Q8WVD3 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 AC093752.3-201ENST00000567343 901 ntBASIC13.14□□□□□ -0.31
RNF138Q8WVD3 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 AL022334.2-201ENST00000610000 484 ntBASIC13.14□□□□□ -0.31
RNF138Q8WVD3 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 NAP1L6-202ENST00000641404 1222 ntBASIC13.14□□□□□ -0.31
RNF138Q8WVD3 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
RNF138Q8WVD3 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms