Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC21■□□□□ 0.95
ARHGEF40Q8TER5 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ARHGEF40Q8TER5 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
ARHGEF40Q8TER5 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ARHGEF40Q8TER5 MIR339-201ENST00000362153 94 ntBASIC21■□□□□ 0.95
ARHGEF40Q8TER5 RPL10-203ENST00000406022 748 ntTSL 3 BASIC21■□□□□ 0.95
ARHGEF40Q8TER5 KRT18P44-201ENST00000416086 1285 ntBASIC21■□□□□ 0.95
ARHGEF40Q8TER5 RPL18AP15-201ENST00000430258 517 ntBASIC21■□□□□ 0.95
ARHGEF40Q8TER5 AC112250.1-201ENST00000504640 745 ntBASIC21■□□□□ 0.95
ARHGEF40Q8TER5 MBP-230ENST00000528160 584 ntTSL 5 BASIC21■□□□□ 0.95
ARHGEF40Q8TER5 SORD2P-201ENST00000558556 1069 ntBASIC21■□□□□ 0.95
ARHGEF40Q8TER5 AC009041.4-201ENST00000620075 638 ntBASIC21■□□□□ 0.95
ARHGEF40Q8TER5 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC21■□□□□ 0.95
ARHGEF40Q8TER5 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
ARHGEF40Q8TER5 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC21■□□□□ 0.95
ARHGEF40Q8TER5 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ARHGEF40Q8TER5 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
ARHGEF40Q8TER5 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
ARHGEF40Q8TER5 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ARHGEF40Q8TER5 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC21■□□□□ 0.95
ARHGEF40Q8TER5 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
ARHGEF40Q8TER5 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
ARHGEF40Q8TER5 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
ARHGEF40Q8TER5 LINC02199-201ENST00000506655 2702 ntBASIC21■□□□□ 0.95
ARHGEF40Q8TER5 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 BX088651.3-201ENST00000418155 352 ntBASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 AC022447.5-201ENST00000504817 392 ntBASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 AC106782.5-201ENST00000616011 337 ntBASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 GH1-203ENST00000351388 685 ntTSL 2 BASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 RPSAP6-201ENST00000417882 882 ntBASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 RN7SL605P-201ENST00000577229 281 ntBASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 AC132825.4-202ENST00000578792 434 ntBASIC20.99■□□□□ 0.95
ARHGEF40Q8TER5 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 AC026691.1-201ENST00000602502 2017 ntBASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 SALL4P6-201ENST00000429385 1691 ntBASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 AC000077.1-201ENST00000420012 953 ntBASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 AC007679.1-201ENST00000458609 502 ntBASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 DPY19L2P4-201ENST00000479881 442 ntBASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 MARK2P17-201ENST00000498560 841 ntBASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 IFNL3P1-201ENST00000595082 501 ntBASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARHGEF40Q8TER5 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ARHGEF40Q8TER5 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC20.97■□□□□ 0.95
ARHGEF40Q8TER5 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ARHGEF40Q8TER5 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
ARHGEF40Q8TER5 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ARHGEF40Q8TER5 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC20.97■□□□□ 0.95
ARHGEF40Q8TER5 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms