Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC019109.1-201ENST00000401725 1874 ntBASIC17.53■□□□□ 0.4
SNED1Q8TER0 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNED1Q8TER0 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC17.53■□□□□ 0.4
SNED1Q8TER0 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNED1Q8TER0 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC17.53■□□□□ 0.4
SNED1Q8TER0 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC17.53■□□□□ 0.4
SNED1Q8TER0 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC17.53■□□□□ 0.4
SNED1Q8TER0 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC17.53■□□□□ 0.4
SNED1Q8TER0 ST5-261ENST00000626808 1071 ntTSL 5 BASIC17.53■□□□□ 0.4
SNED1Q8TER0 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC17.53■□□□□ 0.4
SNED1Q8TER0 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNED1Q8TER0 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNED1Q8TER0 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.53■□□□□ 0.4
SNED1Q8TER0 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SNED1Q8TER0 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
SNED1Q8TER0 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNED1Q8TER0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNED1Q8TER0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.53■□□□□ 0.4
SNED1Q8TER0 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNED1Q8TER0 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNED1Q8TER0 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNED1Q8TER0 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SNED1Q8TER0 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC17.52■□□□□ 0.4
SNED1Q8TER0 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC17.52■□□□□ 0.4
SNED1Q8TER0 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNED1Q8TER0 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC17.52■□□□□ 0.4
SNED1Q8TER0 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.52■□□□□ 0.4
SNED1Q8TER0 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNED1Q8TER0 FUCA1P1-201ENST00000374476 1351 ntBASIC17.52■□□□□ 0.4
SNED1Q8TER0 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SNED1Q8TER0 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SNED1Q8TER0 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.52■□□□□ 0.4
SNED1Q8TER0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNED1Q8TER0 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNED1Q8TER0 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNED1Q8TER0 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNED1Q8TER0 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.52■□□□□ 0.4
SNED1Q8TER0 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SNED1Q8TER0 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC17.52■□□□□ 0.4
SNED1Q8TER0 RPS23-207ENST00000511844 530 ntTSL 2 BASIC17.52■□□□□ 0.4
SNED1Q8TER0 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC17.52■□□□□ 0.4
SNED1Q8TER0 GDNF-207ENST00000515058 764 ntTSL 5 BASIC17.52■□□□□ 0.4
SNED1Q8TER0 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SNED1Q8TER0 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC17.52■□□□□ 0.4
SNED1Q8TER0 FOXN3-AS2-201ENST00000554071 1262 ntBASIC17.52■□□□□ 0.4
SNED1Q8TER0 SRP14-204ENST00000558720 780 ntTSL 2 BASIC17.52■□□□□ 0.4
SNED1Q8TER0 AC006548.2-201ENST00000605217 529 ntBASIC17.52■□□□□ 0.4
SNED1Q8TER0 MIR6746-201ENST00000620971 63 ntBASIC17.52■□□□□ 0.4
SNED1Q8TER0 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNED1Q8TER0 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SNED1Q8TER0 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNED1Q8TER0 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.52■□□□□ 0.39
SNED1Q8TER0 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNED1Q8TER0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNED1Q8TER0 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNED1Q8TER0 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNED1Q8TER0 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNED1Q8TER0 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SNED1Q8TER0 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SNED1Q8TER0 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNED1Q8TER0 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SNED1Q8TER0 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNED1Q8TER0 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
SNED1Q8TER0 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNED1Q8TER0 ZNF436-AS1-201ENST00000335648 2547 ntBASIC17.51■□□□□ 0.39
SNED1Q8TER0 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNED1Q8TER0 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC17.51■□□□□ 0.39
SNED1Q8TER0 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNED1Q8TER0 LINC00265-2P-201ENST00000413372 782 ntBASIC17.51■□□□□ 0.39
SNED1Q8TER0 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNED1Q8TER0 RN7SL582P-201ENST00000491078 279 ntBASIC17.51■□□□□ 0.39
SNED1Q8TER0 RBM4-207ENST00000506523 654 ntTSL 3 BASIC17.51■□□□□ 0.39
SNED1Q8TER0 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC17.51■□□□□ 0.39
SNED1Q8TER0 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC17.51■□□□□ 0.39
SNED1Q8TER0 TCAF2P1-201ENST00000291129 2421 ntBASIC17.51■□□□□ 0.39
SNED1Q8TER0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNED1Q8TER0 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.51■□□□□ 0.39
SNED1Q8TER0 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
SNED1Q8TER0 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNED1Q8TER0 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNED1Q8TER0 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
SNED1Q8TER0 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.51■□□□□ 0.39
SNED1Q8TER0 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SNED1Q8TER0 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.51■□□□□ 0.39
SNED1Q8TER0 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNED1Q8TER0 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNED1Q8TER0 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNED1Q8TER0 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNED1Q8TER0 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNED1Q8TER0 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNED1Q8TER0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNED1Q8TER0 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
SNED1Q8TER0 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
SNED1Q8TER0 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNED1Q8TER0 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SNED1Q8TER0 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNED1Q8TER0 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNED1Q8TER0 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNED1Q8TER0 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNED1Q8TER0 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms