Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 TLE1P1-201ENST00000422965 589 ntBASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 AL591846.1-201ENST00000451736 433 ntBASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 AC104982.3-201ENST00000581995 514 ntBASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 AP001002.3-201ENST00000623482 206 ntBASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 AC139749.1-202ENST00000617529 3139 ntBASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 AC013726.1-201ENST00000563747 2285 ntBASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 AC232323.1-201ENST00000540724 2099 ntBASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 HSPB1P2-201ENST00000448722 546 ntBASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 AC243960.2-201ENST00000600996 747 ntBASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 AL358472.3-201ENST00000608147 415 ntBASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 AL136301.1-201ENST00000615830 422 ntBASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms