Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RFWD2Q8NHY2 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.65□□□□□ -0.06
RFWD2Q8NHY2 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.65□□□□□ -0.07
RFWD2Q8NHY2 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 CLK3P2-201ENST00000427566 1453 ntBASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 AL158070.2-201ENST00000623713 1621 ntBASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 AP001160.2-201ENST00000596071 487 ntBASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 AP001059.3-201ENST00000619053 235 ntBASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 AL031595.1-201ENST00000623969 4709 ntBASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 MIR497HG-202ENST00000572453 3838 ntBASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 AC215219.1-201ENST00000400706 1817 ntBASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RFWD2Q8NHY2 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 AC004945.1-201ENST00000416738 983 ntBASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 SERBP1P3-201ENST00000459980 809 ntBASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 GAPDHP40-201ENST00000505218 1006 ntBASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 Z92544.3-201ENST00000624747 417 ntBASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFWD2Q8NHY2 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms