Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RP1L1Q8IWN7 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 AL157792.1-201ENST00000488281 530 ntBASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 AC026803.1-201ENST00000569130 274 ntBASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 STX3-207ENST00000633708 3111 ntTSL 5 BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 AL603832.2-201ENST00000566195 2125 ntBASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 AP002803.1-201ENST00000528836 498 ntBASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 AC103988.2-201ENST00000561804 725 ntBASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 REXO1L4P-201ENST00000605109 1937 ntBASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 AL805961.2-201ENST00000642139 4817 ntBASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RP1L1Q8IWN7 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
RP1L1Q8IWN7 AC020910.5-201ENST00000623668 1865 ntBASIC13.4□□□□□ -0.27
RP1L1Q8IWN7 AC020916.1-201ENST00000587762 1774 ntBASIC13.4□□□□□ -0.27
RP1L1Q8IWN7 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
RP1L1Q8IWN7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 BUD31-205ENST00000456893 512 ntTSL 5 BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 AC004466.1-201ENST00000599515 1080 ntBASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 AC087045.2-201ENST00000606279 1003 ntBASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 AC144522.1-201ENST00000625111 1658 ntBASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 NAT9-220ENST00000582870 896 ntTSL 5 BASIC13.39□□□□□ -0.27
RP1L1Q8IWN7 AC020922.3-201ENST00000595064 547 ntBASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms