Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 AL138725.1-201ENST00000407347 1314 ntBASIC16.06■□□□□ 0.16
CNGA4Q8IV77 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNGA4Q8IV77 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNGA4Q8IV77 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNGA4Q8IV77 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CNGA4Q8IV77 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.06■□□□□ 0.16
CNGA4Q8IV77 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.06■□□□□ 0.16
CNGA4Q8IV77 AC134915.1-201ENST00000426461 574 ntBASIC16.06■□□□□ 0.16
CNGA4Q8IV77 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.06■□□□□ 0.16
CNGA4Q8IV77 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.06■□□□□ 0.16
CNGA4Q8IV77 DNAJB3-202ENST00000449667 1266 ntBASIC16.06■□□□□ 0.16
CNGA4Q8IV77 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.06■□□□□ 0.16
CNGA4Q8IV77 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.06■□□□□ 0.16
CNGA4Q8IV77 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.06■□□□□ 0.16
CNGA4Q8IV77 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.06■□□□□ 0.16
CNGA4Q8IV77 GCOM2-201ENST00000509133 1104 ntBASIC16.06■□□□□ 0.16
CNGA4Q8IV77 IGHV3-42-201ENST00000520410 361 ntBASIC16.06■□□□□ 0.16
CNGA4Q8IV77 AP001582.1-201ENST00000525856 295 ntBASIC16.06■□□□□ 0.16
CNGA4Q8IV77 TPRX2P-201ENST00000535362 881 ntBASIC16.06■□□□□ 0.16
CNGA4Q8IV77 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.06■□□□□ 0.16
CNGA4Q8IV77 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CNGA4Q8IV77 AC008738.7-201ENST00000609744 511 ntBASIC16.06■□□□□ 0.16
CNGA4Q8IV77 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC16.06■□□□□ 0.16
CNGA4Q8IV77 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNGA4Q8IV77 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNGA4Q8IV77 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CNGA4Q8IV77 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNGA4Q8IV77 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNGA4Q8IV77 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNGA4Q8IV77 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNGA4Q8IV77 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CNGA4Q8IV77 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC16.06■□□□□ 0.16
CNGA4Q8IV77 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 LRRC59-203ENST00000576448 1531 ntBASIC16.05■□□□□ 0.16
CNGA4Q8IV77 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 MIR943-201ENST00000401286 94 ntBASIC16.05■□□□□ 0.16
CNGA4Q8IV77 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 AP000347.1-202ENST00000435868 847 ntBASIC16.05■□□□□ 0.16
CNGA4Q8IV77 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 AC023310.3-201ENST00000557027 670 ntBASIC16.05■□□□□ 0.16
CNGA4Q8IV77 AC100756.1-201ENST00000562736 682 ntBASIC16.05■□□□□ 0.16
CNGA4Q8IV77 AC138749.3-201ENST00000567691 622 ntBASIC16.05■□□□□ 0.16
CNGA4Q8IV77 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 AC116165.1-201ENST00000611806 668 ntBASIC16.05■□□□□ 0.16
CNGA4Q8IV77 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CNGA4Q8IV77 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNGA4Q8IV77 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNGA4Q8IV77 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNGA4Q8IV77 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNGA4Q8IV77 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CNGA4Q8IV77 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.04■□□□□ 0.16
CNGA4Q8IV77 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CNGA4Q8IV77 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNGA4Q8IV77 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC16.04■□□□□ 0.16
CNGA4Q8IV77 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNGA4Q8IV77 AC139712.1-201ENST00000378256 1875 ntBASIC16.04■□□□□ 0.16
CNGA4Q8IV77 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CNGA4Q8IV77 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNGA4Q8IV77 C1QBPP1-201ENST00000400117 770 ntBASIC16.04■□□□□ 0.16
CNGA4Q8IV77 MEP1AP4-201ENST00000423244 1087 ntBASIC16.04■□□□□ 0.16
CNGA4Q8IV77 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNGA4Q8IV77 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CNGA4Q8IV77 SORD2P-201ENST00000558556 1069 ntBASIC16.04■□□□□ 0.16
CNGA4Q8IV77 AC103988.2-201ENST00000561804 725 ntBASIC16.04■□□□□ 0.16
CNGA4Q8IV77 AC104794.3-201ENST00000566840 1248 ntBASIC16.04■□□□□ 0.16
CNGA4Q8IV77 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.04■□□□□ 0.16
CNGA4Q8IV77 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.04■□□□□ 0.16
CNGA4Q8IV77 RET-205ENST00000615310 4337 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms