Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 MYADML-201ENST00000474610 2147 ntBASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 AL355306.1-201ENST00000415580 579 ntBASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 AC093909.1-201ENST00000504731 1122 ntBASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 AC243562.1-201ENST00000560672 389 ntBASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 AC074044.1-201ENST00000609673 707 ntBASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LYSMD2Q8IV50 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 AP003969.2-201ENST00000623739 2275 ntBASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 LINC00567-201ENST00000569854 3409 ntBASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 FO393414.2-201ENST00000405153 598 ntBASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 TARDBPP1-201ENST00000442013 1203 ntBASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 AC104692.2-201ENST00000603054 253 ntBASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 AC010970.1-201ENST00000445125 1848 ntBASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 AL021155.1-201ENST00000438808 2637 ntBASIC12.96□□□□□ -0.33
LYSMD2Q8IV50 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LYSMD2Q8IV50 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
LYSMD2Q8IV50 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.96□□□□□ -0.34
LYSMD2Q8IV50 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LYSMD2Q8IV50 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
LYSMD2Q8IV50 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LYSMD2Q8IV50 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
LYSMD2Q8IV50 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LYSMD2Q8IV50 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LYSMD2Q8IV50 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
LYSMD2Q8IV50 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LYSMD2Q8IV50 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LYSMD2Q8IV50 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms