Protein–RNA interactions for Protein: Q8IV35

WDR49, WD repeat-containing protein 49, humanhuman

Predictions only

Length 697 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR49Q8IV35 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
WDR49Q8IV35 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
WDR49Q8IV35 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
WDR49Q8IV35 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
WDR49Q8IV35 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
WDR49Q8IV35 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
WDR49Q8IV35 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.79■□□□□ 0.12
WDR49Q8IV35 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
WDR49Q8IV35 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
WDR49Q8IV35 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
WDR49Q8IV35 AC007191.1-201ENST00000623179 2995 ntBASIC15.79■□□□□ 0.12
WDR49Q8IV35 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.79■□□□□ 0.12
WDR49Q8IV35 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.79■□□□□ 0.12
WDR49Q8IV35 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
WDR49Q8IV35 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
WDR49Q8IV35 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
WDR49Q8IV35 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.79■□□□□ 0.12
WDR49Q8IV35 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.79■□□□□ 0.12
WDR49Q8IV35 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
WDR49Q8IV35 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.79■□□□□ 0.12
WDR49Q8IV35 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.79■□□□□ 0.12
WDR49Q8IV35 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
WDR49Q8IV35 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
WDR49Q8IV35 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
WDR49Q8IV35 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
WDR49Q8IV35 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.79■□□□□ 0.12
WDR49Q8IV35 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
WDR49Q8IV35 AC004898.1-201ENST00000451057 766 ntBASIC15.79■□□□□ 0.12
WDR49Q8IV35 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.79■□□□□ 0.12
WDR49Q8IV35 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.79■□□□□ 0.12
WDR49Q8IV35 AC006122.1-201ENST00000493323 440 ntBASIC15.79■□□□□ 0.12
WDR49Q8IV35 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.79■□□□□ 0.12
WDR49Q8IV35 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
WDR49Q8IV35 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.79■□□□□ 0.12
WDR49Q8IV35 AC005586.2-201ENST00000563946 837 ntBASIC15.79■□□□□ 0.12
WDR49Q8IV35 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.79■□□□□ 0.12
WDR49Q8IV35 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
WDR49Q8IV35 MIR6869-201ENST00000619434 62 ntBASIC15.79■□□□□ 0.12
WDR49Q8IV35 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.79■□□□□ 0.12
WDR49Q8IV35 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
WDR49Q8IV35 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
WDR49Q8IV35 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
WDR49Q8IV35 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
WDR49Q8IV35 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
WDR49Q8IV35 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.79■□□□□ 0.12
WDR49Q8IV35 AC004899.1-201ENST00000424687 1714 ntBASIC15.79■□□□□ 0.12
WDR49Q8IV35 AC144522.1-201ENST00000625111 1658 ntBASIC15.79■□□□□ 0.12
WDR49Q8IV35 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
WDR49Q8IV35 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.79■□□□□ 0.12
WDR49Q8IV35 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
WDR49Q8IV35 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.79■□□□□ 0.12
WDR49Q8IV35 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
WDR49Q8IV35 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.79■□□□□ 0.12
WDR49Q8IV35 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
WDR49Q8IV35 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
WDR49Q8IV35 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
WDR49Q8IV35 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
WDR49Q8IV35 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.78■□□□□ 0.12
WDR49Q8IV35 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.78■□□□□ 0.12
WDR49Q8IV35 MBLAC2-202ENST00000514906 1936 ntBASIC15.78■□□□□ 0.12
WDR49Q8IV35 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
WDR49Q8IV35 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
WDR49Q8IV35 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
WDR49Q8IV35 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
WDR49Q8IV35 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
WDR49Q8IV35 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.78■□□□□ 0.12
WDR49Q8IV35 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
WDR49Q8IV35 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
WDR49Q8IV35 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
WDR49Q8IV35 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
WDR49Q8IV35 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
WDR49Q8IV35 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
WDR49Q8IV35 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
WDR49Q8IV35 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
WDR49Q8IV35 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.78■□□□□ 0.12
WDR49Q8IV35 RPL18P13-201ENST00000478088 569 ntBASIC15.78■□□□□ 0.12
WDR49Q8IV35 SERPINA13P-202ENST00000478994 924 ntBASIC15.78■□□□□ 0.12
WDR49Q8IV35 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.78■□□□□ 0.12
WDR49Q8IV35 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.78■□□□□ 0.12
WDR49Q8IV35 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
WDR49Q8IV35 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
WDR49Q8IV35 MIR4538-201ENST00000581377 78 ntBASIC15.78■□□□□ 0.12
WDR49Q8IV35 AL118558.3-201ENST00000607414 1079 ntBASIC15.78■□□□□ 0.12
WDR49Q8IV35 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.78■□□□□ 0.12
WDR49Q8IV35 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
WDR49Q8IV35 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.78■□□□□ 0.12
WDR49Q8IV35 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
WDR49Q8IV35 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
WDR49Q8IV35 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
WDR49Q8IV35 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
WDR49Q8IV35 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
WDR49Q8IV35 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.78■□□□□ 0.12
WDR49Q8IV35 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
WDR49Q8IV35 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
WDR49Q8IV35 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
WDR49Q8IV35 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
WDR49Q8IV35 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.78■□□□□ 0.12
WDR49Q8IV35 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.78■□□□□ 0.12
WDR49Q8IV35 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.78■□□□□ 0.12
WDR49Q8IV35 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms