Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATG4DQ86TL0 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 CSF2RBP1-201ENST00000447905 391 ntBASIC13.36□□□□□ -0.27
ATG4DQ86TL0 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 AP000812.2-201ENST00000538934 718 ntBASIC13.36□□□□□ -0.27
ATG4DQ86TL0 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 C2orf69P2-201ENST00000562032 1123 ntBASIC13.36□□□□□ -0.27
ATG4DQ86TL0 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 AL358472.3-201ENST00000608147 415 ntBASIC13.36□□□□□ -0.27
ATG4DQ86TL0 ZACNP1-201ENST00000612259 710 ntBASIC13.36□□□□□ -0.27
ATG4DQ86TL0 MIR6799-201ENST00000620297 69 ntBASIC13.36□□□□□ -0.27
ATG4DQ86TL0 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATG4DQ86TL0 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ATG4DQ86TL0 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATG4DQ86TL0 AC097376.2-205ENST00000610159 5334 ntBASIC13.35□□□□□ -0.27
ATG4DQ86TL0 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.35□□□□□ -0.27
ATG4DQ86TL0 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATG4DQ86TL0 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.35□□□□□ -0.27
ATG4DQ86TL0 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.35□□□□□ -0.27
ATG4DQ86TL0 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATG4DQ86TL0 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATG4DQ86TL0 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATG4DQ86TL0 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATG4DQ86TL0 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATG4DQ86TL0 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATG4DQ86TL0 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ATG4DQ86TL0 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATG4DQ86TL0 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.35□□□□□ -0.27
ATG4DQ86TL0 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATG4DQ86TL0 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATG4DQ86TL0 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATG4DQ86TL0 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
ATG4DQ86TL0 MIR1202-201ENST00000408529 83 ntBASIC13.35□□□□□ -0.27
ATG4DQ86TL0 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ATG4DQ86TL0 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.35□□□□□ -0.27
ATG4DQ86TL0 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms