Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 AL132994.1-201ENST00000554098 400 ntBASIC9.96□□□□□ -0.81
CSMD3Q7Z407 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 LINC00265-2P-201ENST00000413372 782 ntBASIC9.96□□□□□ -0.81
CSMD3Q7Z407 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 HNRNPA1P25-201ENST00000422644 937 ntBASIC9.96□□□□□ -0.81
CSMD3Q7Z407 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 GNG10P1-201ENST00000452289 199 ntBASIC9.96□□□□□ -0.81
CSMD3Q7Z407 RN7SL128P-201ENST00000467883 305 ntBASIC9.96□□□□□ -0.81
CSMD3Q7Z407 FAM86B3P-203ENST00000523992 854 ntBASIC9.96□□□□□ -0.81
CSMD3Q7Z407 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 NT5C-204ENST00000578337 582 ntTSL 2 BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CSMD3Q7Z407 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
CSMD3Q7Z407 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC9.96□□□□□ -0.82
CSMD3Q7Z407 FKBP4P8-201ENST00000610931 1369 ntBASIC9.96□□□□□ -0.82
CSMD3Q7Z407 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC9.96□□□□□ -0.82
CSMD3Q7Z407 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
CSMD3Q7Z407 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
CSMD3Q7Z407 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
CSMD3Q7Z407 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
CSMD3Q7Z407 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
CSMD3Q7Z407 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
CSMD3Q7Z407 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
CSMD3Q7Z407 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC9.96□□□□□ -0.82
CSMD3Q7Z407 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
CSMD3Q7Z407 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC9.96□□□□□ -0.82
CSMD3Q7Z407 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC9.96□□□□□ -0.82
CSMD3Q7Z407 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC9.96□□□□□ -0.82
CSMD3Q7Z407 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
CSMD3Q7Z407 VENTXP3-201ENST00000546480 773 ntBASIC9.96□□□□□ -0.82
CSMD3Q7Z407 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC9.96□□□□□ -0.82
CSMD3Q7Z407 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC9.96□□□□□ -0.82
CSMD3Q7Z407 FBXO36P1-201ENST00000579006 471 ntBASIC9.96□□□□□ -0.82
CSMD3Q7Z407 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC9.96□□□□□ -0.82
CSMD3Q7Z407 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
CSMD3Q7Z407 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.82
CSMD3Q7Z407 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC9.96□□□□□ -0.82
CSMD3Q7Z407 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
CSMD3Q7Z407 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
CSMD3Q7Z407 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
CSMD3Q7Z407 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 ACE3P-201ENST00000423435 1973 ntBASIC9.95□□□□□ -0.82
CSMD3Q7Z407 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 CES1P2-201ENST00000566467 1242 ntBASIC9.95□□□□□ -0.82
CSMD3Q7Z407 HCG18-241ENST00000602290 821 ntTSL 2 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms