Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RN7SL23P-201ENST00000484055 275 ntBASIC11.89□□□□□ -0.51
VPS13CQ709C8 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC11.89□□□□□ -0.51
VPS13CQ709C8 AC087203.1-201ENST00000532111 1181 ntBASIC11.89□□□□□ -0.51
VPS13CQ709C8 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13CQ709C8 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13CQ709C8 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC11.89□□□□□ -0.51
VPS13CQ709C8 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13CQ709C8 AC020931.1-201ENST00000589622 1346 ntBASIC11.89□□□□□ -0.51
VPS13CQ709C8 FKBP4P8-201ENST00000610931 1369 ntBASIC11.89□□□□□ -0.51
VPS13CQ709C8 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC11.89□□□□□ -0.51
VPS13CQ709C8 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC11.89□□□□□ -0.51
VPS13CQ709C8 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13CQ709C8 AC126365.1-201ENST00000578585 1514 ntBASIC11.89□□□□□ -0.51
VPS13CQ709C8 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
VPS13CQ709C8 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13CQ709C8 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC11.89□□□□□ -0.51
VPS13CQ709C8 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
VPS13CQ709C8 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13CQ709C8 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13CQ709C8 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13CQ709C8 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13CQ709C8 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13CQ709C8 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC11.89□□□□□ -0.51
VPS13CQ709C8 IGHEP1-201ENST00000521393 651 ntBASIC11.89□□□□□ -0.51
VPS13CQ709C8 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC11.89□□□□□ -0.51
VPS13CQ709C8 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC11.89□□□□□ -0.51
VPS13CQ709C8 AL118522.1-201ENST00000611368 560 ntBASIC11.89□□□□□ -0.51
VPS13CQ709C8 AJ011931.1-201ENST00000618749 2492 ntBASIC11.89□□□□□ -0.51
VPS13CQ709C8 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13CQ709C8 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13CQ709C8 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC11.88□□□□□ -0.51
VPS13CQ709C8 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC11.88□□□□□ -0.51
VPS13CQ709C8 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
VPS13CQ709C8 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC11.88□□□□□ -0.51
VPS13CQ709C8 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13CQ709C8 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
VPS13CQ709C8 RPL14-203ENST00000416518 812 ntTSL 3 BASIC11.88□□□□□ -0.51
VPS13CQ709C8 AC104961.1-201ENST00000427605 771 ntBASIC11.88□□□□□ -0.51
VPS13CQ709C8 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC11.88□□□□□ -0.51
VPS13CQ709C8 RN7SL375P-201ENST00000492442 298 ntBASIC11.88□□□□□ -0.51
VPS13CQ709C8 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC11.88□□□□□ -0.51
VPS13CQ709C8 DLK1-205ENST00000556051 469 ntTSL 2 BASIC11.88□□□□□ -0.51
VPS13CQ709C8 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC11.88□□□□□ -0.51
VPS13CQ709C8 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
VPS13CQ709C8 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13CQ709C8 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13CQ709C8 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
VPS13CQ709C8 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13CQ709C8 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13CQ709C8 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13CQ709C8 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13CQ709C8 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13CQ709C8 NHP2P1-201ENST00000335274 462 ntBASIC11.88□□□□□ -0.51
VPS13CQ709C8 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC11.88□□□□□ -0.51
VPS13CQ709C8 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13CQ709C8 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC11.88□□□□□ -0.51
VPS13CQ709C8 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC11.88□□□□□ -0.51
VPS13CQ709C8 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
VPS13CQ709C8 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC11.88□□□□□ -0.51
VPS13CQ709C8 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC11.88□□□□□ -0.51
VPS13CQ709C8 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC11.88□□□□□ -0.51
VPS13CQ709C8 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC11.88□□□□□ -0.51
VPS13CQ709C8 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13CQ709C8 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC11.88□□□□□ -0.51
VPS13CQ709C8 ERP29P1-201ENST00000442902 706 ntBASIC11.88□□□□□ -0.51
VPS13CQ709C8 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13CQ709C8 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC11.88□□□□□ -0.51
VPS13CQ709C8 AC091769.1-201ENST00000619576 568 ntBASIC11.88□□□□□ -0.51
VPS13CQ709C8 AC110057.1-201ENST00000636031 898 ntBASIC11.88□□□□□ -0.51
VPS13CQ709C8 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
VPS13CQ709C8 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
VPS13CQ709C8 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
VPS13CQ709C8 AL080243.1-201ENST00000423293 1060 ntBASIC11.87□□□□□ -0.51
VPS13CQ709C8 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC11.87□□□□□ -0.51
VPS13CQ709C8 AC010900.1-201ENST00000449849 1296 ntBASIC11.87□□□□□ -0.51
VPS13CQ709C8 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC11.87□□□□□ -0.51
VPS13CQ709C8 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC11.87□□□□□ -0.51
VPS13CQ709C8 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC11.87□□□□□ -0.51
VPS13CQ709C8 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC11.87□□□□□ -0.51
VPS13CQ709C8 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VPS13CQ709C8 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VPS13CQ709C8 CICP16-201ENST00000502609 2813 ntBASIC11.87□□□□□ -0.51
VPS13CQ709C8 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VPS13CQ709C8 LINC02486-201ENST00000604157 3000 ntBASIC11.87□□□□□ -0.51
VPS13CQ709C8 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC11.87□□□□□ -0.51
VPS13CQ709C8 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
VPS13CQ709C8 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
VPS13CQ709C8 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VPS13CQ709C8 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VPS13CQ709C8 PDXDC2P-206ENST00000534700 1315 ntBASIC11.87□□□□□ -0.51
VPS13CQ709C8 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC11.87□□□□□ -0.51
VPS13CQ709C8 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VPS13CQ709C8 AL035414.1-201ENST00000451327 857 ntBASIC11.87□□□□□ -0.51
VPS13CQ709C8 AC025186.1-201ENST00000478174 870 ntBASIC11.87□□□□□ -0.51
VPS13CQ709C8 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VPS13CQ709C8 AL132994.1-201ENST00000554098 400 ntBASIC11.87□□□□□ -0.51
VPS13CQ709C8 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC11.87□□□□□ -0.51
VPS13CQ709C8 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
VPS13CQ709C8 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC11.87□□□□□ -0.51
VPS13CQ709C8 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms